DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub65B and Tuba4a

DIOPT Version :10

Sequence 1:NP_729172.1 Gene:betaTub65B / 117406 FlyBaseID:FBgn0052396 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001007005.1 Gene:Tuba4a / 316531 RGDID:1359623 Length:448 Species:Rattus norvegicus


Alignment Length:453 Identity:155/453 - (34%)
Similarity:241/453 - (53%) Gaps:29/453 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVTLQIGGAGNAIGDSFWHVISHEHGV--------DYASGRFGGTSPLQLERINVFFNATAS 57
            |||.:::.:|.||..:|::.|.:...|||:        |...|  ||.     :....||..|.:
  Rat     1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIG--GGD-----DSFTTFFCETGA 58

  Fly    58 KRFYARTILIDTEASTIQRLNAS--SQLYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTR 120
            .:...|.:.:|.|.:.|..:...  .||:.||..:.|.|.|.||:|||::|.|..|:|.||:..|
  Rat    59 GKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIR 123

  Fly   121 REVESVDSLQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNAL 185
            :..:....||||.:.||.|||||||.|||:||.|...|.......:...|:|.:|..||||||::
  Rat   124 KLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 188

  Fly   186 LSTPALVNNSHLTFCLDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLR 250
            |:|...:.:|...|.:||||::.||.|||.::...|.::|.:::..:|.||..|||.|.||..|.
  Rat   189 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLT 253

  Fly   251 KIYVNMVPFPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGI 315
            :...|:||:||:||.:..:||:::.::....:.:|:|:....|...|.:...|.|.||.:....:
  Rat   254 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLL 318

  Fly   316 FRGRMSPREVDQLMTGVRNKNINNFVDWIPNNIKTAICDIPP--------RGLKMSATFIGNTTA 372
            :||.:.|::|:..:..::.|....||||.|...|..|...||        ..::.:...:.||||
  Rat   319 YRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA 383

  Fly   373 IQTLFQRLLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYR----SSAEGEDSG 431
            |...:.||......|..::|.:|||.||||||.||.:|::::.|:..||.    .|.|.||.|
  Rat   384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGIDSYEDEDEG 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub65BNP_729172.1 beta_tubulin 2..425 CDD:276956 149/444 (34%)
Tuba4aNP_001007005.1 PTZ00335 1..448 CDD:185562 155/453 (34%)
MREC motif. /evidence=ECO:0000250|UniProtKB:P68363 1..4 2/2 (100%)

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