DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub65B and Tubb6

DIOPT Version :10

Sequence 1:NP_729172.1 Gene:betaTub65B / 117406 FlyBaseID:FBgn0052396 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001020846.1 Gene:Tubb6 / 307351 RGDID:1305887 Length:447 Species:Rattus norvegicus


Alignment Length:434 Identity:229/434 - (52%)
Similarity:310/434 - (71%) Gaps:3/434 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRFGGTSPLQLERINVFFNATASKRFYARTI 65
            |||||.:|.|..||.||..||.|||.|||:|.|.| :.|.|.||||||:|::|.::||::..|..
  Rat     1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGG-YVGDSALQLERISVYYNESSSKKYVPRAA 64

  Fly    66 LIDTEASTIQRLNAS--SQLYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTRREVESVDS 128
            |:|.|..|:..:.:.  .||:||:||:.|...||||:|:|::|:||.::|.||:..|:|.|..|.
  Rat    65 LVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVVRKECEHCDC 129

  Fly   129 LQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNALLSTPALVN 193
            ||||||.||:|||||||:.:|::..:.|:|||.::..:..:|||.:|..|||||||.||...||.
  Rat   130 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVE 194

  Fly   194 NSHLTFCLDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLRKIYVNMVP 258
            |:..|:|:|||||:.||.|.|||....|..:||:|:.||||:||.|||||||||.|||:.|||||
  Rat   195 NTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVP 259

  Fly   259 FPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGIFRGRMSPR 323
            ||||||.:||||||.....||:...||.||.||:|.:.|::.|.|.|.|:.||.|.:|||.||.:
  Rat   260 FPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGPMSMK 324

  Fly   324 EVDQLMTGVRNKNINNFVDWIPNNIKTAICDIPPRGLKMSATFIGNTTAIQTLFQRLLDASMSML 388
            |||:.|..::|||.:.||:|||||:|.|:||||||||||::|||||:||||.||:|:.:...:|.
  Rat   325 EVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMF 389

  Fly   389 RRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYRSSAEGEDSGG 432
            ||||.|||:|||||:|.||.:|:..:..::.:|:...:...:.|
  Rat   390 RRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATVNDG 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub65BNP_729172.1 beta_tubulin 2..425 CDD:276956 227/424 (54%)
Tubb6NP_001020846.1 PLN00220 1..431 CDD:215107 228/430 (53%)

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