DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub65B and Tuba1c

DIOPT Version :10

Sequence 1:NP_729172.1 Gene:betaTub65B / 117406 FlyBaseID:FBgn0052396 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_033474.1 Gene:Tuba1c / 22146 MGIID:1095409 Length:449 Species:Mus musculus


Alignment Length:453 Identity:159/453 - (35%)
Similarity:246/453 - (54%) Gaps:29/453 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVTLQIGGAGNAIGDSFWHVISHEHGV--------DYASGRFGGTSPLQLERINVFFNATAS 57
            |||.:::.:|.||..||::.|.:...|||:        |...|  ||.     :..|.||:.|.:
Mouse     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIG--GGD-----DSFNTFFSETGA 58

  Fly    58 KRFYARTILIDTEASTIQRLNASS--QLYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTR 120
            .:...|.:.:|.|.:.|..:...:  ||:.||..:.|.|.|.||:|||::|.|..|:|.||:..|
Mouse    59 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIR 123

  Fly   121 REVESVDSLQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNAL 185
            :..:....||||.:.||.|||||||.|||:||.|...|.......:...|:|.:|..||||||::
Mouse   124 KLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 188

  Fly   186 LSTPALVNNSHLTFCLDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLR 250
            |:|...:.:|...|.:||||::.||.|||.::...|.::|.:::..:|.||..|||.|.||..|.
Mouse   189 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLT 253

  Fly   251 KIYVNMVPFPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGI 315
            :...|:||:||:||.:..:||:::.::....:.||:|:....|...|.:...|.|.||.:....:
Mouse   254 EFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLL 318

  Fly   316 FRGRMSPREVDQLMTGVRNKNINNFVDWIPNNIKTAICDIPP--------RGLKMSATFIGNTTA 372
            :||.:.|::|:..:..::.|....||||.|...|..|...||        ..::.:...:.||||
Mouse   319 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA 383

  Fly   373 IQTLFQRLLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYR----SSAEGEDSG 431
            |...:.||......|..::|.:|||.||||||.||.:|::::.|:..||.    .||||:|.|
Mouse   384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSAEGDDEG 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub65BNP_729172.1 beta_tubulin 2..425 CDD:276956 152/444 (34%)
Tuba1cNP_033474.1 PTZ00335 1..448 CDD:185562 159/453 (35%)
MREC motif. /evidence=ECO:0000250|UniProtKB:P68363 1..4 2/2 (100%)

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