DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub65B and ben-1

DIOPT Version :10

Sequence 1:NP_729172.1 Gene:betaTub65B / 117406 FlyBaseID:FBgn0052396 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_497728.2 Gene:ben-1 / 175461 WormBaseID:WBGene00000248 Length:444 Species:Caenorhabditis elegans


Alignment Length:450 Identity:242/450 - (53%)
Similarity:314/450 - (69%) Gaps:11/450 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRFGGTSPLQLERINVFFNATASKRFYARTI 65
            |||||.:|.|..||.||..||.|||.|||:. ..|.:.|.|.||||||||::|.....::..|.:
 Worm     1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQ-PDGTYKGESDLQLERINVYYNEANGGKYVPRAV 64

  Fly    66 LIDTEASTIQRLNAS--SQLYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTRREVESVDS 128
            |:|.|..|:..:.:.  .||:||:|||.|...||||:|:|::|:||.::|.||:..|:|.|..|.
 Worm    65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDC 129

  Fly   129 LQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNALLSTPALVN 193
            ||||||.||:|||||||:.:|::..:.|:|||.::.::..:|||.:|..|||||||.||...||.
 Worm   130 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVE 194

  Fly   194 NSHLTFCLDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLRKIYVNMVP 258
            |:..|||:|||||:.||.|.|||....|..:||:|::||||:||||||||||||.|||:.|||||
 Worm   195 NTDETFCIDNEALYDICFRTLKLSNPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVP 259

  Fly   259 FPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGIFRGRMSPR 323
            ||||||.:||||||.....|.:...||:||.||:|.:.|::.|.|.|.|:.||.|.:||||||.|
 Worm   260 FPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMR 324

  Fly   324 EVDQLMTGVRNKNINNFVDWIPNNIKTAICDIPPRGLKMSATFIGNTTAIQTLFQRLLDASMSML 388
            |||..|..|:|||.:.||:|||||:|||:|||||||||||||||||:||||.||:|:.:...:|.
 Worm   325 EVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMF 389

  Fly   389 RRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYRSSAEG---EDSGGGGGGGGGRSGSAE 445
            ||||.|||||||||:|.||.:|:..:..::.:|:...|.   ||     |...|..|.||
 Worm   390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAEED-----GELDGTDGDAE 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub65BNP_729172.1 beta_tubulin 2..425 CDD:276956 233/424 (55%)
ben-1NP_497728.2 PLN00220 1..444 CDD:215107 240/448 (54%)

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