DRSC/TRiP Functional Genomics Resources

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Protein Alignment Desat1 and scd

DIOPT Version :9

Sequence 1:NP_652731.1 Gene:Desat1 / 117369 FlyBaseID:FBgn0086687 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_942110.2 Gene:scd / 386661 ZFINID:ZDB-GENE-031106-3 Length:326 Species:Danio rerio


Alignment Length:297 Identity:166/297 - (55%)
Similarity:217/297 - (73%) Gaps:2/297 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 KKAEKRRLKLVWRNIIAFGYLHLAALYGAYLMVTSAKWQTCILAYFLYVISGLGITAGAHRLWAH 125
            |...|..:|:||||:|....||:||:||.:| :.||...|.:.|:..:|..|||||||.||||:|
Zfish    29 KPGPKPPMKIVWRNVILMSLLHIAAVYGLFL-IPSAHPLTLLWAFACFVYGGLGITAGVHRLWSH 92

  Fly   126 RSYKAKWPLRVILVIFNTIAFQDAAYHWARDHRVHHKYSETDADPHNATRGFFFSHVGWLLCKKH 190
            |||||..|||:.|.|.|::|||:..|.|:||||||||||||||||||:.||||||||||||.:||
Zfish    93 RSYKATLPLRIFLAIGNSMAFQNDIYEWSRDHRVHHKYSETDADPHNSNRGFFFSHVGWLLVRKH 157

  Fly   191 PEVKAKGKGVDLSDLRADPILMFQKKYYMILMPIACFIIPTVVPMYAWGESFMNAWFVATMFRWC 255
            |||..:|:.::|:||:||.::|||:::|.:.:.:.||::|||||.|.||||...|:|:.|:.|:.
Zfish   158 PEVIERGRKLELTDLKADKVVMFQRRFYKLSVVLMCFVVPTVVPCYMWGESLWIAYFIPTLLRYA 222

  Fly   256 FILNVTWLVNSAAHKFGGRPYDKFINPSENISVAILAFGEGWHNYHHVFPWDYKTAEFGKYSLNF 320
            ..||.|||||||||.:|.||||..|.|.||..|...|.|||:|||||.||:||.|:|:| :.||.
Zfish   223 LGLNSTWLVNSAAHMWGNRPYDGNIGPRENRFVTFSAIGEGYHNYHHTFPYDYSTSEYG-WKLNL 286

  Fly   321 TTAFIDFFAKIGWAYDLKTVSTDIIKKRVKRTGDGTH 357
            ||.|:|....:|.|.:.|.||.::|..||||||||::
Zfish   287 TTIFVDTMCFLGLASNRKRVSKELILARVKRTGDGSY 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Desat1NP_652731.1 Delta9-FADS-like 97..338 CDD:239582 137/240 (57%)
FA_desaturase 98..305 CDD:278890 122/206 (59%)
scdNP_942110.2 Delta9-FADS-like 64..304 CDD:239582 137/240 (57%)
FA_desaturase 68..273 CDD:278890 122/204 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 280 1.000 Domainoid score I1638
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H134602
Inparanoid 1 1.050 359 1.000 Inparanoid score I2172
OMA 1 1.010 - - QHG63267
OrthoDB 1 1.010 - - D296120at33208
OrthoFinder 1 1.000 - - FOG0000495
OrthoInspector 1 1.000 - - mtm6351
orthoMCL 1 0.900 - - OOG6_100468
Panther 1 1.100 - - O PTHR11351
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16
SonicParanoid 1 1.000 - - X207
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.970

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