DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Desat1 and Scd2

DIOPT Version :9

Sequence 1:NP_652731.1 Gene:Desat1 / 117369 FlyBaseID:FBgn0086687 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_033154.2 Gene:Scd2 / 20250 MGIID:98240 Length:358 Species:Mus musculus


Alignment Length:290 Identity:172/290 - (59%)
Similarity:219/290 - (75%) Gaps:2/290 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 RLKLVWRNIIAFGYLHLAALYGAYLMVTSAKWQTCILAYFLYVISGLGITAGAHRLWAHRSYKAK 131
            :|:.||||||....|||.||||..| |.|.|..||:.||..||||.|||||||||||:||:|||:
Mouse    67 KLEYVWRNIILMALLHLGALYGITL-VPSCKLYTCLFAYLYYVISALGITAGAHRLWSHRTYKAR 130

  Fly   132 WPLRVILVIFNTIAFQDAAYHWARDHRVHHKYSETDADPHNATRGFFFSHVGWLLCKKHPEVKAK 196
            .|||:.|:|.||:|||:..|.||||||.|||:|||.|||||:.||||||||||||.:|||.||.|
Mouse   131 LPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEK 195

  Fly   197 GKGVDLSDLRADPILMFQKKYYMILMPIACFIIPTVVPMYAWGESFMNAWFVATMFRWCFILNVT 261
            |..:|:|||:|:.::|||::||...:.:.||::||:||.|.|||:|:|:..|:|..|:..:||.|
Mouse   196 GGKLDMSDLKAEKLVMFQRRYYKPGLLLMCFVLPTLVPWYCWGETFVNSLCVSTFLRYAVVLNAT 260

  Fly   262 WLVNSAAHKFGGRPYDKFINPSENISVAILAFGEGWHNYHHVFPWDYKTAEFGKYSLNFTTAFID 326
            ||||||||.:|.|||||.|:..|||.|::.|.|||:|||||.||:||..:|: ::.:||||.|||
Mouse   261 WLVNSAAHLYGYRPYDKNISSRENILVSMGAVGEGFHNYHHAFPYDYSASEY-RWHINFTTFFID 324

  Fly   327 FFAKIGWAYDLKTVSTDIIKKRVKRTGDGT 356
            ..|.:|.|||.|.||...:..|:||||||:
Mouse   325 CMALLGLAYDRKRVSRAAVLARIKRTGDGS 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Desat1NP_652731.1 Delta9-FADS-like 97..338 CDD:239582 145/240 (60%)
FA_desaturase 98..305 CDD:278890 127/206 (62%)
Scd2NP_033154.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..39
Delta9-FADS-like 96..336 CDD:239582 145/240 (60%)
FA_desaturase 101..305 CDD:278890 126/203 (62%)
Histidine box-1. /evidence=ECO:0000305 119..124 4/4 (100%)
Histidine box-2. /evidence=ECO:0000305 156..160 2/3 (67%)
Histidine box-3. /evidence=ECO:0000305 297..301 3/3 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 291 1.000 Domainoid score I1524
eggNOG 1 0.900 - - E1_COG1398
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 369 1.000 Inparanoid score I2119
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63267
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000495
OrthoInspector 1 1.000 - - mtm8712
orthoMCL 1 0.900 - - OOG6_100468
Panther 1 1.100 - - LDO PTHR11351
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16
SonicParanoid 1 1.000 - - X207
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.860

Return to query results.
Submit another query.