DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prt and Slc18b1

DIOPT Version :9

Sequence 1:NP_001097887.1 Gene:prt / 117368 FlyBaseID:FBgn0043005 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_898939.2 Gene:Slc18b1 / 76306 MGIID:1923556 Length:457 Species:Mus musculus


Alignment Length:510 Identity:109/510 - (21%)
Similarity:197/510 - (38%) Gaps:98/510 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 LEDTSSFSKLGYRSGESPGGGHPQLYISKHPIPGKSMVNFTLLQLSTEATTTTTSIATTTNSPHN 153
            :::..|.:..|...|:.|||...:                |..:||.|......|.|:.......
Mouse     1 MDEAGSPAPAGTGGGDDPGGSTRE----------------TSRRLSREQIFVLVSAASMNLGCMM 49

  Fly   154 STSMQSP--PKLTVGQSGGTNVTGIGHKSRNRKLASGHPPTHDNSSNDNSNKELTLTQENGSIGL 216
            :.|:..|  |                 |...:|.||                       |..||:
Mouse    50 TYSILGPFFP-----------------KEAEKKGAS-----------------------NTMIGM 74

  Fly   217 LLAMKALVQLIFNPIVGNASSKFGYRLPIVVGTFFLLLSSLVFTV------GESYWAL-LVARAV 274
            :....||.:|:.:.:.|......|.:...:.|.|.....:::|.|      |..:.|: .:.|.|
Mouse    75 IFGCYALFELLASLVFGKYLVHIGAKFMFIAGMFVSGGVTILFGVLDQLPEGPIFIAMCFLVRIV 139

  Fly   275 QGVGSACINICGMSLVAQHYPEEARRSKVMGIILGSIALGVLLGYPFGGILYDLMGKSAPFIILS 339
            ..:|.........|::|:.:|...  :.|||.:.....||::.|.|.||:||...|...|||.|.
Mouse   140 DAIGFGAAITASSSILAKAFPNNV--ATVMGSLEVFSGLGLVAGPPLGGLLYQSFGYEVPFIFLG 202

  Fly   340 TLMFLSLGLQLLTMDLTVQPEVVVEDRPK----WRSLLECKMILAIVLAIWFSTSTMAMLEPCLP 400
            .::.|     ::.::|.:.|.  .|..|.    |:.:...||.|...:.|..| |....|:|.|.
Mouse   203 CIVLL-----MIPLNLYILPS--YESDPGKQSFWKLVTLPKMGLLAFVIISLS-SCFGFLDPTLS 259

  Fly   401 IWLIQYLKPNKWQLGTVFIPDSVGYFVGTNFFGSIAYKYGQVKVSCI---SLLLVGVASIL--IP 460
            :::::....:...:|.||:..|:.|.:.:..||.::.|...::...:   :|:..|...:|  :|
Mouse   260 LFVMEKFSLSTGYVGLVFLGLSLSYAISSPLFGLLSDKMPTLRKWLLVFGNLITAGCYMLLGPVP 324

  Fly   461 SATTVAQLLLPHFAL---GLGIGVIDAALVPLLATFVDATLAQ--EDQGEGSSSMSSYGTVYAIQ 520
            .....:||.|....|   |:..|:   :::|.....:....|.  ||      |:|:.|.|..:.
Mouse   325 LLHIKSQLWLLVLVLVVNGISAGM---SIIPTFPEMLSCAYANGFED------SISTLGLVSGLF 380

  Fly   521 QTSVSLAYCLAPLIGGELAQTFGFAWLMRIVGIFNMIYGPILVYLHQKYDPKALR 575
            ....|:...:.|::||.|.:..||.|...:.|::.::.|..:...:...|..|.|
Mouse   381 GAMWSVGAFMGPILGGFLCEKIGFEWAAAMQGLWTLLSGVSMALFYLWEDSTARR 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prtNP_001097887.1 MFS 212..565 CDD:119392 86/373 (23%)
MFS_1 212..532 CDD:284993 77/340 (23%)
Slc18b1NP_898939.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 7/41 (17%)
MFS 37..426 CDD:119392 96/447 (21%)
MFS_1 48..392 CDD:284993 85/402 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 438..457
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3764
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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