DRSC/TRiP Functional Genomics Resources

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Protein Alignment prt and slc18a2

DIOPT Version :10

Sequence 1:NP_001097887.1 Gene:prt / 117368 FlyBaseID:FBgn0043005 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001243154.1 Gene:slc18a2 / 553304 ZFINID:ZDB-GENE-080514-1 Length:515 Species:Danio rerio


Alignment Length:575 Identity:191/575 - (33%)
Similarity:304/575 - (52%) Gaps:100/575 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 NRCLIAVIVYLALLLDNMLLTVIVPILPDYLASLEADTSSAV----VLSLEDTSSFSKLGYRSGE 104
            :|.||.:||::|||||||||||:|||:|.||.:::.:.:..|    :..|..:|:|..:      
Zfish    22 SRRLILLIVFIALLLDNMLLTVVVPIIPSYLYTVDDEAAQMVKNHSMTPLSPSSTFQSI------ 80

  Fly   105 SPGGGHPQLYISKHPIPGKSMVNFTLLQLSTEATTTTTSIATTTNSPHNSTSMQSPPKLTVGQSG 169
                  ..||.:...:.|.|.      |:||..   ..|:|.|..||.|.:..            
Zfish    81 ------VSLYDNTTRVTGFSP------QMSTAG---PMSLAPTFVSPQNQSDC------------ 118

  Fly   170 GTNVTGIGHKSRNRKLASGHPPTHDNSSNDNSNKELTLTQENGSIGLLLAMKALVQLIFNPIVGN 234
                                 |..|:.          |..||..:|||.|.||.||||.||.:|.
Zfish   119 ---------------------PKADDQ----------LLNENVKVGLLFASKATVQLITNPFIGP 152

  Fly   235 ASSKFGYRLPIVVGTFFLLLSSLVFTVGESYWALLVARAVQGVGSACINICGMSLVAQHYPEEAR 299
            .:::.||::|:..|...:.:|:::|....||..|.:||::|||||:|.::.||.::|..|.::..
Zfish   153 LTNRIGYQIPMFAGFCIMFVSTIMFAFSSSYTLLFLARSLQGVGSSCSSVAGMGMLASVYTDDEE 217

  Fly   300 RSKVMGIILGSIALGVLLGYPFGGILYDLMGKSAPFIILSTLMFLSLGLQLLTMDLTVQPEVVVE 364
            |...:||.||.:|:|||:|.|||.::|:.:||:|||:||:.|..|...|||..:    ||..|..
Zfish   218 RGNAIGIALGGLAMGVLVGPPFGSVMYEFVGKTAPFLILAVLAVLDGALQLFVL----QPSKVEP 278

  Fly   365 DRPKWRS---LLECKMILAIVLAIWFSTSTMAMLEPCLPIWLIQYLKPNKWQLGTVFIPDSVGYF 426
            :..|..|   |::...||....:|.|:...:|||||.||||:::.:.|.|||||..|:|.|:.|.
Zfish   279 ESQKGTSLITLMKDPYILIAAGSICFANMAIAMLEPALPIWMMETMCPRKWQLGIAFVPASISYL 343

  Fly   427 VGTNFFGSIAYKYGQVKVSCISLLLVGVASILIPSATTVAQLLLPHFALGLGIGVIDAALVPLLA 491
            :|||.|..:|:|.|:...|.|.:||||::.:.:|.|..:..|::|:|.:|..||::|::::|::.
Zfish   344 IGTNIFAVLAHKMGRWLCSLIGMLLVGISILCVPLAKDIYGLIVPNFGVGFAIGMVDSSMMPIMG 408

  Fly   492 TFVDATLAQEDQGEGSSSMSSYGTVYAIQQTSVSLAYCLAPLIGGELAQTFGFAWLMRIVGIFNM 556
            ..||.           ..:|.||:||||...:..:.:.|.|..||.:|::.||.|||.|:|:.::
Zfish   409 YLVDL-----------RHVSVYGSVYAIADVAFCMGFALGPSAGGAIARSIGFPWLMTIIGLVDI 462

  Fly   557 IYGPILVYLHQKYDPKALREQHNDMLLQS---------SGRGSRYKQLYNSMDVE 602
            ::.|:..:|.   :|.| .|:...:|:.|         |.:||.| |:.:..|.|
Zfish   463 MFAPLCFFLR---NPPA-NEEKMAILMDSNCSMKTRSYSTQGSSY-QMGDDFDPE 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prtNP_001097887.1 MFS_SLC18A1_2_VAT1_2 209..566 CDD:340942 136/359 (38%)
slc18a2NP_001243154.1 MFS_SLC18A1_2_VAT1_2 26..472 CDD:340942 176/524 (34%)

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