DRSC/TRiP Functional Genomics Resources

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Protein Alignment prt and slc18a3b

DIOPT Version :9

Sequence 1:NP_001097887.1 Gene:prt / 117368 FlyBaseID:FBgn0043005 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_957401.1 Gene:slc18a3b / 394082 ZFINID:ZDB-GENE-040426-1410 Length:493 Species:Danio rerio


Alignment Length:594 Identity:167/594 - (28%)
Similarity:263/594 - (44%) Gaps:160/594 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AAVQLNAPGRRSSTPSGA--NGSSNRCLIAVIVYLALLLDNMLLTVIVPILPDYLASLEADTSSA 84
            |.:||:|.|.||....||  .....|.|:.|:|.:||||||||..|||||:|||||.|.      
Zfish    13 AVLQLSAMGERSRELGGALREPERKRRLLLVVVCVALLLDNMLYMVIVPIIPDYLADLR------ 71

  Fly    85 VVLSLEDTSSFSKLGYRSGESPGGGHPQLYISKHPIPGKSMVNFTLLQLSTEATTTTTSIATTTN 149
                                                                             
Zfish    72 ----------------------------------------------------------------- 71

  Fly   150 SPHNSTSMQSPPKLTVGQSGGTNVTGIGHKSRNRKLASGHPPTHDNSSNDNSNKELTLTQENGSI 214
                            |:.|                              ||:.:|.:     .|
Zfish    72 ----------------GERG------------------------------NSSADLDI-----QI 85

  Fly   215 GLLLAMKALVQLIFNPIVGNASSKFGYRLPIVVGTFFLLLSSLVFTVGESYWALLVARAVQGVGS 279
            |:|.|.|||:||:.||:.|....:.||.||:::|...:.||:.:|...|:|..|..||::||:||
Zfish    86 GVLFASKALLQLLVNPLSGTFIDRVGYDLPLLIGLLVMFLSTCIFAFAENYGTLFAARSLQGLGS 150

  Fly   280 ACINICGMSLVAQHYPEEARRSKVMGIILGSIALGVLLGYPFGGILYDLMGKSAPFIILSTLMFL 344
            |..:..|::::|..:.|||.||:.:||.|..|:.|.|:..|||||||:..||..|||:|:.:. |
Zfish   151 AFADTSGIAMIADKFTEEAERSRALGIALAFISFGSLVAPPFGGILYEFAGKRVPFIVLACVC-L 214

  Fly   345 SLGLQLLTMDLTVQPEVVVEDR---------PKWRSLLECKMILAIVLAIWFSTSTMAMLEPCLP 400
            :.|:.|||:   |:|   ..||         |..|.::: ..|..:..|:......:|.|||.:.
Zfish   215 ADGVLLLTV---VKP---FSDRTRENMPVGTPIHRLMVD-PYIAVVAGALTVCNIPLAFLEPTIA 272

  Fly   401 IWLIQYLKPNKWQLGTVFIPDSVGYFVGTNFFGSIAYKYGQVK--VSCISLLLVGVASILIPSAT 463
            .|:...:..:|||:|.|::|..:.:.:|......:|.:|.:.:  ...:.::::|.:|..:|:..
Zfish   273 NWMESTMDASKWQMGLVWLPAFLPHVLGVYITVRLAARYPERQWFYGALGMVIIGASSCTVPACK 337

  Fly   464 TVAQLLLPHFALGLGIGVIDAALVPLLATFVDATLAQEDQGEGSSSMSSYGTVYAIQQTSVSLAY 528
            |..:|:.|...:..||.::|.||:|.||..||.           ..:|.||:||||...|.|:||
Zfish   338 TFGELVFPLCGICFGIALVDTALLPTLAFLVDV-----------RHVSVYGSVYAIADISYSVAY 391

  Fly   529 CLAPLIGGELAQTFGFAWLMRIVGIFNMIYGPILVYLHQKYDPKALREQHNDMLLQSSGRGSRYK 593
            .:.|::.|::....||..|...:|:.|::|.|.|:.|......|....:.| :||:....|    
Zfish   392 AMGPVVAGQIVHNLGFVQLNLGMGLVNVLYAPALLLLRPVCQIKPSFSERN-VLLEEGPSG---- 451

  Fly   594 QLYNSMDVE 602
             ||:|:.:|
Zfish   452 -LYDSIRLE 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prtNP_001097887.1 MFS 212..565 CDD:119392 120/363 (33%)
MFS_1 212..532 CDD:284993 110/330 (33%)
slc18a3bNP_957401.1 MFS_1 54..395 CDD:284993 128/481 (27%)
2_A_01_02 86..226 CDD:273318 61/143 (43%)
MFS 270..>431 CDD:304372 48/171 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 467..493
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59108
OrthoDB 1 1.010 - - D406900at33208
OrthoFinder 1 1.000 - - FOG0000700
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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