DRSC/TRiP Functional Genomics Resources

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Protein Alignment prt and Slc18b1

DIOPT Version :10

Sequence 1:NP_001097887.1 Gene:prt / 117368 FlyBaseID:FBgn0043005 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001387757.1 Gene:Slc18b1 / 309570 RGDID:1306962 Length:455 Species:Rattus norvegicus


Alignment Length:393 Identity:89/393 - (22%)
Similarity:174/393 - (44%) Gaps:40/393 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 NGSIGLLLAMKALVQLIFNPIVGNASSKFGYRLPIVVGTFFLLLSSLVFTV------GESYWAL- 268
            |.:||::....||.:|:.:.:.|......|.:...:.|.|.....:::|.|      |..:.|: 
  Rat    68 NTTIGMIFGCYALFELLASLVFGKYLVHIGAKFMFIAGMFVSGGVTILFGVLDQLPEGPIFIAMC 132

  Fly   269 LVARAVQGVGSACINICGMSLVAQHYPEEARRSKVMGIILGSIALGVLLGYPFGGILYDLMGKSA 333
            .:.|.|..:|.........|::|:.:|...  :.|||.:.....||::.|.|.||:||...|...
  Rat   133 FLVRIVDAIGFGAAITASSSILAKAFPNNV--ATVMGSLEVFSGLGLVAGPPLGGLLYQSFGYEV 195

  Fly   334 PFIILSTLMFLSLGLQLLTMDLTVQPEVVVEDRPK---WR--SLLECKMILAIVLAIWFSTSTMA 393
            |||.|..::.|     ::.::|.:.|. ...|..|   |:  :|.:..:|..:::::   :|...
  Rat   196 PFIFLGCIVLL-----MIPLNLCILPS-YESDAGKQSFWKLVTLPKIGLIAFVIISL---SSCFG 251

  Fly   394 MLEPCLPIWLIQYLKPNKWQLGTVFIPDSVGYFVGTNFFGSIAYKYGQVKVSCI---SLLLVGVA 455
            .|:|.|.:::::....:...:|.||:..|:.|.:.:..||.::.|...::...:   :|:..|..
  Rat   252 FLDPTLSLFVMKKFSLSTGYVGLVFLGLSLSYAISSPLFGLLSDKMPNLRKWFLVFGNLITAGCY 316

  Fly   456 SIL--IPSATTVAQLLLPHFALGLGIGVIDA--ALVPLLATFVDATLAQ--EDQGEGSSSMSSYG 514
            .:|  ||.....:||.|  ..|.|.|..:.|  :::|.....:....|.  ||      .:|:.|
  Rat   317 MLLGPIPLLHIKSQLWL--LVLVLVINGVSAGMSIIPTFPEMLSCAYANGFED------GISTLG 373

  Fly   515 TVYAIQQTSVSLAYCLAPLIGGELAQTFGFAWLMRIVGIFNMIYGPILVYLHQKYDPKALREQHN 579
            .|..:.....|:...:.|::||.|.:..||.|...|.|::.::.|..:...:...|....|.:..
  Rat   374 LVSGLFGAMWSVGAFMGPILGGFLCEKIGFEWAAAIQGLWTLLSGVAMALFYLWEDSTMRRSKAQ 438

  Fly   580 DML 582
            ::|
  Rat   439 NIL 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prtNP_001097887.1 MFS_SLC18A1_2_VAT1_2 209..566 CDD:340942 86/375 (23%)
Slc18b1NP_001387757.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
MFS_SLC18B1 36..425 CDD:340943 86/375 (23%)
Blue background indicates that the domain is not in the aligned region.

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