DRSC/TRiP Functional Genomics Resources

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Protein Alignment prt and unc-17

DIOPT Version :10

Sequence 1:NP_001097887.1 Gene:prt / 117368 FlyBaseID:FBgn0043005 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_001379838.1 Gene:unc-17 / 24105312 WormBaseID:WBGene00006756 Length:532 Species:Caenorhabditis elegans


Alignment Length:570 Identity:154/570 - (27%)
Similarity:241/570 - (42%) Gaps:138/570 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 SSNRCLIAVIVYLALLLDNMLLTVIVPILPDYLASLEADTSSAVVLSLEDTSSFSKLGYRSGESP 106
            :..:|:: |||.:||||||||..|||||:|.||..:.                            
 Worm    28 NQKKCVL-VIVSIALLLDNMLYMVIVPIIPKYLRDIH---------------------------- 63

  Fly   107 GGGHPQLYISKHPIPGKSMVNFTLLQLSTEATTTTTSIATTTNSPHNSTSMQSPPKLTVGQSGGT 171
                                |:.:                |....||.||..:.....|.:.|| 
 Worm    64 --------------------NYQV----------------TFEGYHNETSQLANGTYLVREVGG- 91

  Fly   172 NVTGIGHKSRNRKLASGHPPTHDNSSNDNSNKELTLTQENGSIGLLLAMKALVQLIFNPIVGNAS 236
                                            .:....|...:|.|.|.|||:|:..||..|...
 Worm    92 --------------------------------RINFLDEELELGWLFASKALLQIFVNPFSGYII 124

  Fly   237 SKFGYRLPIVVGTFFLLLSSLVFTVGESYWALLVARAVQGVGSACINICGMSLVAQHYPEEARRS 301
            .:.||.:|:::|...:..|:.:|.:|:||..||.||::||.|||..:..|::::|..:.||..||
 Worm   125 DRVGYEIPMILGLCTMFFSTAIFALGKSYGVLLFARSLQGFGSAFADTSGLAMIADRFTEENERS 189

  Fly   302 KVMGIILGSIALGVLLGYPFGGILYDLMGKSAPFIILSTLMFLSLGLQLLTMDLTVQPE------ 360
            ..:||.|..|:.|.|:..|||.:||.|.||..||:|||   |:.|. ..:.:.:.:.|.      
 Worm   190 AALGIALAFISFGCLVAPPFGSVLYSLAGKPVPFLILS---FVCLA-DAIAVFMVINPHRRGTDS 250

  Fly   361 --VVVEDRPKWRSLLECKMILAIVLAIWFSTSTMAMLEPCLPIWLIQYLKPNK-WQLGTV----F 418
              ..|:..|.||..:: ..|.....|:..:..::|.|||.:..|:.:.:.... |.:|.:    |
 Worm   251 HGEKVQGTPMWRLFMD-PFIACCSGALIMANVSLAFLEPTITTWMSEMMPDTPGWLVGVIWLPPF 314

  Fly   419 IPDSVGYFVGTNFFGSIAYKYGQVKVSCISLLLVGVASILIPSATTVAQLLLPHFALGLGIGVID 483
            .|..:|.:|......  |:.:....::.:.|.:.|:|...||..|:|.||::|...:..||.:||
 Worm   315 FPHVLGVYVTVKMLR--AFPHHTWAIAMVGLAMEGIACFAIPYTTSVMQLVIPLSFVCFGIALID 377

  Fly   484 AALVPLLATFVDATLAQEDQGEGSSSMSSYGTVYAIQQTSVSLAYCLAPLIGGELAQTFGFAWLM 548
            .:|:|:|...||           :..:|.||:||||...|.||||...|:|.|.:...:||..|.
 Worm   378 TSLLPMLGHLVD-----------TRHVSVYGSVYAIADISYSLAYAFGPIIAGWIVTNWGFTALN 431

  Fly   549 RIVGIFNMIYGPILVYLHQKYDPKALREQHNDMLLQSSGRGSRYKQLYNS 598
            .|:...|:.|.|:|.         .||:.|:...|.:.|..:...||.:|
 Worm   432 IIIFATNVTYAPVLF---------LLRKVHSYDTLGAKGDTAEMTQLNSS 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prtNP_001097887.1 MFS_SLC18A1_2_VAT1_2 209..566 CDD:340942 117/369 (32%)
unc-17NP_001379838.1 MFS_SLC18A3_VAChT 34..449 CDD:340941 145/539 (27%)

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