DRSC/TRiP Functional Genomics Resources

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Protein Alignment prt and Slc18a3

DIOPT Version :9

Sequence 1:NP_001097887.1 Gene:prt / 117368 FlyBaseID:FBgn0043005 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_068358.2 Gene:Slc18a3 / 20508 MGIID:1101061 Length:530 Species:Mus musculus


Alignment Length:587 Identity:160/587 - (27%)
Similarity:264/587 - (44%) Gaps:110/587 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QLNAPGRRSSTPSGA---NGSSNRCLIAVIVYLALLLDNMLLTVIVPILPDYLASLEADTSSAVV 86
            |..|...:.|...||   .....|.|:.|||.:||||||||..|||||:|||:|.:...:.|..:
Mouse     9 QARAAATKLSEAVGAALQEPQRQRRLVLVIVCVALLLDNMLYMVIVPIVPDYIAHMRGGSESPTL 73

  Fly    87 LSLEDTSSFSKLGYRSGESPGGGHPQLYISKHPIPGKSMVNFTLLQLSTEATTTTTSIATTTNSP 151
            :|                         .:.:..:|..::.|.:....:|.|:.|....|.:...|
Mouse    74 IS-------------------------EVWEPTLPPPTLANASAYLANTSASPTAAGSARSILRP 113

  Fly   152 HNSTSMQSPPKLTVGQSGGTNVTGIGHKSRNRKLASGHPPTHDNSSNDNSNKELTLTQENGSIGL 216
            ...|.                                                    .|:..||:
Mouse   114 RYPTE----------------------------------------------------SEDVKIGV 126

  Fly   217 LLAMKALVQLIFNPIVGNASSKFGYRLPIVVGTFFLLLSSLVFTVGESYWALLVARAVQGVGSAC 281
            |.|.||::||:.||:.|....:..|.:|:::|...:..|:::|...|.|..|..||::||:|||.
Mouse   127 LFASKAILQLLVNPLSGPFIDRMSYDVPLLIGLGVMFASTVMFAFAEDYATLFAARSLQGLGSAF 191

  Fly   282 INICGMSLVAQHYPEEARRSKVMGIILGSIALGVLLGYPFGGILYDLMGKSAPFIILSTLMFLSL 346
            .:..|::::|..||||..||:.:|:.|..|:.|.|:..|||||||:..||..||::|:.   :||
Mouse   192 ADTSGIAMIADKYPEEPERSRALGVALAFISFGSLVAPPFGGILYEFAGKRVPFLVLAA---VSL 253

  Fly   347 GLQLLTMDLTVQPEVVVEDR-------PKWRSLLECKMILAIVLAIWFSTSTMAMLEPCLPIWLI 404
            ...||.:.:..........|       |..|.:|: ..|..:..|:......:|.|||.:..|:.
Mouse   254 FDALLLLAVAKPFSAAARARANLPVGTPIHRLMLD-PYIAVVAGALTTCNIPLAFLEPTIATWMK 317

  Fly   405 QYLKPNKWQLGTVFIPDSVGYFVGTNFFGSIAYKYGQVK--VSCISLLLVGVASILIPSATTVAQ 467
            ..:..::|::|.|::|..|.:.:|......:|.:|..::  ...:.|.::||:|.::|:..:.|.
Mouse   318 HTMAASEWEMGMVWLPAFVPHVLGVYLTVRLAARYPHLQWLYGALGLAVIGVSSCVVPACRSFAP 382

  Fly   468 LLLPHFALGLGIGVIDAALVPLLATFVDATLAQEDQGEGSSSMSSYGTVYAIQQTSVSLAYCLAP 532
            |::....|..||.::|.||:|.||..||.           ..:|.||:||||...|.|:||.|.|
Mouse   383 LVVSLCGLCFGIALVDTALLPTLAFLVDV-----------RHVSVYGSVYAIADISYSVAYALGP 436

  Fly   533 LIGGELAQTFGFAWLMRIVGIFNMIYGPILVYLHQKYDPKALREQHNDMLLQSSGRGSRYKQLYN 597
            ::.|.:..:.||..|...:|:.|::|.|:|:.| :............|:||....:|     ||:
Mouse   437 IVAGHIVHSLGFEQLSLGMGLANLLYAPVLLLL-RNVGLLTRSRSERDVLLDEPPQG-----LYD 495

  Fly   598 SM 599
            :|
Mouse   496 AM 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prtNP_001097887.1 MFS 212..565 CDD:119392 114/361 (32%)
MFS_1 212..532 CDD:284993 104/328 (32%)
Slc18a3NP_068358.2 MFS_1 124..436 CDD:284993 104/326 (32%)
2_A_01_02 125..260 CDD:273318 54/137 (39%)
Mediates interaction with SEC14L1. /evidence=ECO:0000269|PubMed:17092608 471..530 7/32 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 504..530
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3764
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59108
OrthoDB 1 1.010 - - D406900at33208
OrthoFinder 1 1.000 - - FOG0000700
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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