DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prt and LOC100495897

DIOPT Version :9

Sequence 1:NP_001097887.1 Gene:prt / 117368 FlyBaseID:FBgn0043005 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_002932791.2 Gene:LOC100495897 / 100495897 -ID:- Length:467 Species:Xenopus tropicalis


Alignment Length:549 Identity:146/549 - (26%)
Similarity:244/549 - (44%) Gaps:120/549 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 NRCLIAVIVYLALLLDNMLLTVIVPILPDYLASLEADTSSAVVLSLEDTSSFSKLGYRSGESPGG 108
            :|.|:.::|.:||.:|.:|.|||.||||..|.......||.|                       
 Frog    16 SRILVLIVVTVALFVDCILNTVIAPILPTLLIGKNTSNSSVV----------------------- 57

  Fly   109 GHPQLYISKHPIPGKSMVNFTLLQLSTEATTTTTSIATTTNSPHNSTSMQSPPKLTVGQSGGTNV 173
                           |...||||                   |.||:.                 
 Frog    58 ---------------SNYTFTLL-------------------PDNSSK----------------- 71

  Fly   174 TGIGHKSRNRKLASGHPPTHDNSSNDNSNKELTLTQENGSIGLLLAMKALVQLIFNPIVGNASSK 238
             ||...........|...|....::|.         ::..||||||.|.::|::.|||||..:::
 Frog    72 -GIYQLQNANGTQDGECYTKGKENSDG---------QDFRIGLLLAFKGMLQIVANPIVGVLTNR 126

  Fly   239 FGYRLPIVVGTFFLLLSSLVFTVGESYWALLVARAVQGVGSACINICGMSLVAQHYPEEARRSKV 303
            |||..|::||...:..|:|::..||.|..|.|||.:||:||:...:.|::|:|..:|::..|:|.
 Frog   127 FGYDAPLLVGFAVVFFSTLMYAFGEQYVFLCVARGLQGIGSSLTTVPGLALLANTFPDDEERAKA 191

  Fly   304 MGIILGSIALGVLLGYPFGGILYDLMGKSAPFIILSTLMFLSLGLQLLTMDLTVQPEVVVEDRPK 368
            |.|....:|:|.|:|.|||.::....|||:||.:|:.:..|...|:|..:            |||
 Frog   192 MAISTSGLAVGALVGAPFGSLMNGFFGKSSPFYVLAAVTLLDGALRLCIL------------RPK 244

  Fly   369 ----------WRSLLECKMILAIVLAIWFSTSTMAMLEPCLPIWLIQYLKPNKWQLGTVFIPDSV 423
                      :.:||....||..|:..:.:....::|:..:|:.:::::....:|||..|:|..:
 Frog   245 FSPGSIPATPYLTLLADPYILVPVVGYFLNKLNSSILQAIVPVRMMEHMCAPSYQLGLAFVPAML 309

  Fly   424 GYFVGTNFFGSIAYKYGQVKVSCISLLLVGVASILIPSATTVAQLLLPHFALGLGIGVIDAALVP 488
            ...:..|.|..::.|:|:.....:..::.|:..|.:|.|..:..|:.|...||:|..::.|:::|
 Frog   310 TTILTLNGFAILSLKWGRWLCLMLGFIIQGIGIICLPLAANIFGLIGPSIVLGIGTALVGASIMP 374

  Fly   489 LLATFVDATLAQEDQGEGSSSMSSYGTVYAIQQTSVSLAYCLAPLIGGELAQTFGFAWLMRIVGI 553
            |:|..:|.           ...|.||.||||...::.|.:.:.||.||.:|...||.|:|.|:.:
 Frog   375 LMAYLIDL-----------RHTSVYGGVYAITDAALCLGFAIGPLFGGAIASAIGFTWVMVILCV 428

  Fly   554 FNMIYGPILVYLHQ---KYDPKALREQHN 579
            ..:||.|:.:.|..   |.:.|.:..|.|
 Frog   429 LLIIYAPLFILLRNVSGKDEKKPILNQEN 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prtNP_001097887.1 MFS 212..565 CDD:119392 110/362 (30%)
MFS_1 212..532 CDD:284993 97/329 (29%)
LOC100495897XP_002932791.2 MFS 20..441 CDD:421695 139/527 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1371520at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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