DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prt and LOC100495571

DIOPT Version :9

Sequence 1:NP_001097887.1 Gene:prt / 117368 FlyBaseID:FBgn0043005 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_002932789.2 Gene:LOC100495571 / 100495571 -ID:- Length:468 Species:Xenopus tropicalis


Alignment Length:555 Identity:149/555 - (26%)
Similarity:246/555 - (44%) Gaps:131/555 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 NRCLIAVIVYLALLLDNMLLTVIVPILPDYLASLEADTSSAVVLSLEDTSSFSKLGYRSGESPGG 108
            :|.||.::|.:||.:|.::.|||.||||..|.......||.|                       
 Frog    16 SRILILIVVTVALFVDCIINTVIAPILPTLLIGKNTSNSSVV----------------------- 57

  Fly   109 GHPQLYISKHPIPGKSMVNFTLLQLSTEATTTTTSIATTTNSPHNSTSMQSPPKLTVGQSGGTNV 173
                                              |..|:|..|.||:.                 
 Frog    58 ----------------------------------SNYTSTLLPDNSSK----------------- 71

  Fly   174 TGIGHKSRNRKLASGHPPTHDNSSNDNSNKELTLTQENGS-----IGLLLAMKALVQLIFNPIVG 233
             || ::.:|   |:|   |.|...       .|..:||..     ||||||.|.::|::.|||||
 Frog    72 -GI-YQLQN---ANG---TQDGEC-------YTKGKENSDGQEFWIGLLLAFKGMLQMVANPIVG 121

  Fly   234 NASSKFGYRLPIVVGTFFLLLSSLVFTVGESYWALLVARAVQGVGSACINICGMSLVAQHYPEEA 298
            ..:::|||..|::||...:..|:|::..||.|..|.|||.:||:||:...|.|::|:|..:|::.
 Frog   122 VLTNRFGYDAPLLVGFAVVFFSTLMYAFGEQYVFLCVARGLQGIGSSLTIIPGLALLANTFPDDE 186

  Fly   299 RRSKVMGIILGSIALGVLLGYPFGGILYDLMGKSAPFIILSTLMFLSLGLQLLTMDLTVQPEVVV 363
            .|:|.|.|....:.:|:|||.|||.::....|||:||.:|:.:..|...|:|..:          
 Frog   187 ERAKAMAISTSGLTVGILLGAPFGSLMNGSFGKSSPFYVLAAVTLLDGALRLCIL---------- 241

  Fly   364 EDRPK-----------WRSLLECKMILAIVLAIWFSTSTMAMLEPCLPIWLIQYLKPNKWQLGTV 417
              ||.           :.:||....||..|:..:.:....::|:..:||.:::::....:|||..
 Frog   242 --RPSKFSPGSIPATPYLTLLADPYILVTVVGYFLTKLHSSLLQAIVPIRMMEHMCAPSYQLGLA 304

  Fly   418 FIPDSVGYFVGTNFFGSIAYKYGQVKVSCISLLLVGVASILIPSATTVAQLLLPHFALGLGIGVI 482
            |:|..:...:..|.|..::.|:|:.....:..::.|:..|..|.|..:..|:.|...||:|..::
 Frog   305 FVPAMLTTILTLNGFAILSLKWGRWLCLMLGFIIQGIGIICFPLAANIFGLIGPSIVLGIGTALV 369

  Fly   483 DAALVPLLATFVDATLAQEDQGEGSSSMSSYGTVYAIQQTSVSLAYCLAPLIGGELAQTFGFAWL 547
            .|:::||:|..:|.           ...|.||.:|||...:..|.:.:.||.||.:|...||.|:
 Frog   370 GASIMPLMAYLIDL-----------RHTSVYGGIYAITDAAFCLGFAIGPLFGGAIASAIGFTWV 423

  Fly   548 MRIVGIFNMIYGPILVYLHQ---KYDPKALREQHN 579
            |.|:.:..:||.|:.:.|..   |.:.|.:..|.|
 Frog   424 MVILCVLLIIYAPLFILLRNVSGKDEKKPILNQEN 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prtNP_001097887.1 MFS 212..565 CDD:119392 110/368 (30%)
MFS_1 212..532 CDD:284993 97/335 (29%)
LOC100495571XP_002932789.2 MFS 20..442 CDD:421695 142/533 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59108
OrthoDB 1 1.010 - - D1371520at2759
OrthoFinder 1 1.000 - - FOG0000700
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23506
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.030

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