DRSC/TRiP Functional Genomics Resources

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Protein Alignment HBS1 and eef1a1l2

DIOPT Version :9

Sequence 1:NP_001286906.1 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001035074.1 Gene:eef1a1l2 / 664756 ZFINID:ZDB-GENE-050706-188 Length:462 Species:Danio rerio


Alignment Length:446 Identity:162/446 - (36%)
Similarity:254/446 - (56%) Gaps:28/446 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 QKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVLDETGEERA 308
            :|.||:::||||||:||||..|||:|..|.:.:|.:.|.|:|:.::||.||.||||||:...||.
Zfish     4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68

  Fly   309 RGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFESGFELGGQT 373
            ||||:|:...:.||....||::|||||:|||.|||:|.:|||.|:|:|.|..||||:|....|||
Zfish    69 RGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQT 133

  Fly   374 REHAILVRSLGVNQLGVVINKLDTV--GWSQDRFTEIVTKLKSFLKLAGFKDSDVSFTPCSGLTG 436
            ||||:|..:|||.||.|.:||:|:.  .:||.||.||..::.:::|..|:..:.|:|.|.||..|
Zfish   134 REHALLAYTLGVKQLIVGVNKMDSTEPPYSQARFEEITKEVSAYIKKIGYNPATVAFVPISGWHG 198

  Fly   437 ENLTKKAQEPALT-NWY------------SGRHLLDVIENFKIPERAIDRPLRMSVSDIYKGTGS 488
            :|:.    ||:.. .|:            :|..||:.:::...|.|..|:|||:.:.|:||..|.
Zfish   199 DNML----EPSSNMGWFKGWKIERKEGGANGVTLLEALDSILPPSRPTDKPLRLPLQDVYKIGGI 259

  Fly   489 GFCISGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVTLPALDINNVTVGC 553
            |....||||||.|.....|.........:|||:.|:....|....||.|...:..:.:.::..|.
Zfish   260 GTVPVGRVETGTLKAGMIVTFAPVNVTTEVKSVEMHHESLTEALPGDNVGFNVKNVSVKDIRRGN 324

  Fly   554 IISDPQTPIPV-TTRFQARIIVFNVKVPITMGF-PVLLHHQSLIEPAVVCK---LTASIHKSTGE 613
            :..|.:...|: ...|.:::|:.|....|:.|: |||..|.:    .:.||   |...|.:.:|:
Zfish   325 VAGDSKNDPPMEAANFTSQVIILNHPGQISQGYAPVLDCHTA----HIACKFAELKEKIDRRSGK 385

  Fly   614 VVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMVTKI 669
            .::..|:.|.:...|::.:...:|:|:|.::.:..|||..:|....|:|.|::..:
Zfish   386 KLEDNPKALKSGDAAIILMIPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKAV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_001286906.1 HBS1_N 83..145 CDD:286079
TEF1 241..669 CDD:227581 162/444 (36%)
EF1_alpha 249..468 CDD:206670 102/233 (44%)
HBS1-like_II 474..557 CDD:293912 25/82 (30%)
HBS1_C_III 561..669 CDD:294008 28/112 (25%)
eef1a1l2NP_001035074.1 PTZ00141 1..460 CDD:185474 162/446 (36%)
EF1_alpha 9..238 CDD:206670 102/232 (44%)
EF1_alpha_II 242..332 CDD:293894 27/89 (30%)
EF1_alpha_III 335..438 CDD:294004 27/106 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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