DRSC/TRiP Functional Genomics Resources

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Protein Alignment HBS1 and 42Sp50

DIOPT Version :9

Sequence 1:NP_001286906.1 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001011438.1 Gene:42Sp50 / 496924 XenbaseID:XB-GENE-5853280 Length:463 Species:Xenopus tropicalis


Alignment Length:452 Identity:163/452 - (36%)
Similarity:254/452 - (56%) Gaps:32/452 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 ERADQKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVLDETG 304
            ::..||:|:::::|||||:||||..|||:|..|....|.:.|.|..:.:|||.||.:||:||:..
 Frog     3 DKTPQKTHLNVVIIGHVDSGKSTTTGHLIYKCGGFDPRALEKVEAAAAQLGKGSFKFAWILDKLK 67

  Fly   305 EERARGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFESGFEL 369
            .||.||||:|:...:.:|....:|::|||||:|||.|||:|.:|||||||||.|..||||:|...
 Frog    68 AERERGITIDISLWKFQTNRFTITIIDAPGHRDFIKNMITGTSQADVALLVVSAATGEFEAGVSR 132

  Fly   370 GGQTREHAILVRSLGVNQLGVVINKLDTVG--WSQDRFTEIVTKLKSFLKLAGFKDSDVSFTPCS 432
            .|||||||:|..::||.|:.|.:||:|...  :|..||.|:|..:..:||..|:..:.:.|.|.|
 Frog   133 NGQTREHALLAYTMGVKQMIVCVNKMDLTDPPYSHKRFDEVVRNVTVYLKKIGYNPTTIPFVPVS 197

  Fly   433 GLTGENLTKKAQEPALTNWY------------SGRHLLDVIENFKIPERAIDRPLRMSVSDIYKG 485
            |.||||::..:|:   ..|:            .|:.||:|::....|.|..::|||:.:.|:||.
 Frog   198 GWTGENISSPSQK---MGWFKGWKVKRKDGFTKGQSLLEVLDALVPPVRPANKPLRLPLQDVYKI 259

  Fly   486 TGSGFCISGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVTLPALDINNVT 550
            .|.|....|::|||:|.....:....|...|:|||:.|:..|....|.|..|...:..:.:.::.
 Frog   260 GGIGTVPVGKIETGILKPGMTITFAPSGFAAEVKSIEMHHEPLQTAFPGFNVGFNVKNIAVKSLK 324

  Fly   551 VGCII----SDPQTPIPVTTRFQARIIVFNVKVPITMGF-PVLLHHQSLIEPAVVCKLT---ASI 607
            .|.:.    |||.|.   .:.|.|::|:.|....|..|: ||:..|.:    .:.|:.|   ..|
 Frog   325 RGNVAGNSKSDPPTE---ASSFTAQVIILNHPGLIKAGYSPVIDCHTA----HITCQFTELQEKI 382

  Fly   608 HKSTGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMVTKI 669
            .:.||:.::..|..|.:...|::.|:..:|.|:||:.|:..|||...|....|:|.|:|..:
 Frog   383 DRRTGKKLEDNPGVLKSGDAAIITLKPIKPFCVERFFDYPPLGRFAARDLKQTVAVGVVKSV 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_001286906.1 HBS1_N 83..145 CDD:286079
TEF1 241..669 CDD:227581 163/449 (36%)
EF1_alpha 249..468 CDD:206670 99/232 (43%)
HBS1-like_II 474..557 CDD:293912 24/86 (28%)
HBS1_C_III 561..669 CDD:294008 31/111 (28%)
42Sp50NP_001011438.1 PTZ00141 7..447 CDD:185474 163/448 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 1 1.000 - - FOG0000314
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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