DRSC/TRiP Functional Genomics Resources

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Protein Alignment HBS1 and gspt1

DIOPT Version :9

Sequence 1:NP_001286906.1 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001003992.1 Gene:gspt1 / 445485 ZFINID:ZDB-GENE-040822-36 Length:564 Species:Danio rerio


Alignment Length:632 Identity:199/632 - (31%)
Similarity:309/632 - (48%) Gaps:110/632 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 QEE--EADEDEDEDAAFAKARRDSESFQMPQLDEIEQAKLSSCVDEVRSVVGDAVSERRIVETSM 125
            ||:  ||..|.:..:||.....::..| :|..       ||      |....:|.|:...|..||
Zfish    13 QEDDVEATADTELQSAFTGLNVNAPEF-VPSF-------LS------RGPPENATSDGTDVVASM 63

  Fly   126 KFDYDMQKILDEILNEETNKSAKPAVNKMKAPAAPVLPKTVSKTVPTPPPKISLKEPRRGF---- 186
                ::.:.:..:.|.||:.||.....:...|                    ..:||..|.    
Zfish    64 ----EISEPVGAVENGETDASAVETWEQKGEP--------------------DKEEPGGGSPADT 104

  Fly   187 ----------------EIPSPKVPSSPVVSGRNTPVDISAGDDISRSSATVFKVSKEQAVRNARQ 235
                            |:|:||:|..|                                      
Zfish   105 GCFGDEAQDEMMEEDEEMPTPKLPPPP-------------------------------------- 131

  Fly   236 LYEKERADQKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVL 300
                ..|.:|.|::::.||||||||||:.|.::|.||.|.:|.:.|:|:|:|:..::::..:|.|
Zfish   132 ----PDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVEKRTLEKYEREAKEKNRETWYLSWAL 192

  Fly   301 DETGEERARGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFES 365
            |...|||.:|.|::||::..||:.|..|:|||||||.|:||||.||:|||:|:||:.|.:||||:
Zfish   193 DTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFET 257

  Fly   366 GFELGGQTREHAILVRSLGVNQLGVVINKLD--TVGWSQDRFTEIVTKLKSFLKLAGFK-DSDVS 427
            |||.||||||||:|.::.||..|.|:|||:|  ||.||.||:.|...||..|||..||. ..|:.
Zfish   258 GFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLDRYEECKEKLVPFLKKVGFNPKKDIH 322

  Fly   428 FTPCSGLTGENLTKKAQEPALTNWYSGRHLLDVIENFKIPERAIDRPLRMSVSDIYKGTGSGFCI 492
            |.|||||||.||.:.:.   |..||:|...:..:::..|..|:.|.|||:.:.|.||..|:  .:
Zfish   323 FMPCSGLTGANLKESSD---LCPWYTGLPFIPHLDSLPIFSRSSDGPLRLPIVDKYKDMGT--VV 382

  Fly   493 SGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVTLPALDINNVTVGCIISD 557
            .|::|:|.:....::::..:|...:|.||..::........|:.:.:.|..::...:..|.|:.:
Zfish   383 LGKLESGSIAKAQQLIMMPNRHTVEVLSLLSDDVETEYAGPGENLKLRLKGIEEEEILPGFILCN 447

  Fly   558 PQTPIPVTTRFQARIIVFNVKVPITMGFPVLLHHQSLIEPAVVCKLTASIHKSTGEVVKKKPRCL 622
            .:........|.|:|::...|..|..|:..:||..:.||...:..|...:.|.|||..|.:||.:
Zfish   448 AENLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQISALICLVDKKTGEKSKTRPRFV 512

  Fly   623 GNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMVTKI 669
            ..:...:..|..:..||:|.:.||.::||..||..|.|||.|.|.|:
Zfish   513 KQDQVCIARLRAAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKL 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_001286906.1 HBS1_N 83..145 CDD:286079 13/61 (21%)
TEF1 241..669 CDD:227581 166/430 (39%)
EF1_alpha 249..468 CDD:206670 109/221 (49%)
HBS1-like_II 474..557 CDD:293912 18/82 (22%)
HBS1_C_III 561..669 CDD:294008 34/107 (32%)
gspt1NP_001003992.1 PAM2 <32..44 CDD:284542 2/19 (11%)
TEF1 138..561 CDD:227581 165/427 (39%)
EF1_alpha 141..358 CDD:206670 108/219 (49%)
eRF3_II 366..447 CDD:293906 18/82 (22%)
eRF3_C_III 453..559 CDD:294003 34/105 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5256
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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