DRSC/TRiP Functional Genomics Resources

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Protein Alignment HBS1 and eIF5B

DIOPT Version :10

Sequence 1:NP_652729.2 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_651974.1 Gene:eIF5B / 44261 FlyBaseID:FBgn0026259 Length:1144 Species:Drosophila melanogaster


Alignment Length:708 Identity:140/708 - (19%)
Similarity:243/708 - (34%) Gaps:224/708 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ISKNKD----IQEEEAD----EDEDEDAAFAKARRDSESFQMPQLDEIE-QAKLSSCVDEVRSVV 111
            :.|.|:    ::.|||:    |||.|:|.....|.::|..:..:..|.| :|:|.          
  Fly   311 LRKRKEEEERLEREEAERIRLEDEREEARLEAVRLEAERKEKKKQREAERKARLK---------- 365

  Fly   112 GDAVSERRIVETSMKFD-YDMQKILD-------EILNEETNKSAKPAV----NKMKAP------- 157
                :|.:::....|.| ...|.:|:       ||.:....:..:|..    ||.|.|       
  Fly   366 ----AEGKLLTKKQKEDRARAQALLESLKAQGLEIPDPNDKRPTRPGTRIRPNKKKGPKEEAAEE 426

  Fly   158 ----AAPVLPKTVSKTVPTPPPKISLKEPRRGFEI------PSPKVPSSPVVSGRNTPV------ 206
                |........:........|...:..:..::.      |.|:..:|...:...|..      
  Fly   427 EAKAAEAEAQSAAAAAAAAAAEKAEEERVKESWDATDSEAEPEPEEETSQATNNGKTEAAEEENE 491

  Fly   207 ---------------DISAGD-DISRSSATVFKVSKEQAVR-NARQLYEKERADQKSHIH----- 249
                           |.|.|| |.||..:.:....:.:.:| .||.|..:..|::|....     
  Fly   492 DTDDDEDDDDDEDDSDDSDGDSDDSREVSVLANDPESRRLRAEARILKRQAEAEKKRSTDELRAG 556

  Fly   250 -MIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVLDETGEERARGITM 313
             :.|:||||.||:.::           .::...|.|:|:                    |.|||.
  Fly   557 VVCVLGHVDTGKTKIL-----------DKLRRTHVQDSE--------------------AGGITQ 590

  Fly   314 DVGQSR-----IETKTKIV-------------TLLDAPGHKDFIPNMISGATQADVALLVVDATR 360
            .:|.:.     |:.:||.|             .::|.|||:.|......|::..|:|:||||...
  Fly   591 QIGATNVPIEAIKEQTKYVKAAAGFEHRLPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMH 655

  Fly   361 GEFESGFELGGQTREHAILVRSLGVNQLGVVINKLDTV-GWSQDRFTEIVTKLKS---------- 414
            |       |..||.|...|::......: |.:||:|.: .|.|....::...||.          
  Fly   656 G-------LEPQTIESIQLLKKKKCPFI-VALNKIDRLYDWKQLARRDVRDVLKEQQSNTQLEFQ 712

  Fly   415 ------FLKLAG--------FKDSD----VSFTPCSGLTGENLTKKAQEPALTNWYSGRHLL--- 458
                  .|:.|.        ::::|    :|..|.|.::||.:              |..|.   
  Fly   713 QRTKDVILQFAEQGLNAALFYENTDPKTYISLVPTSAISGEGM--------------GNLLFMIA 763

  Fly   459 DVIENFKIPERAIDRPLRMSVSDIYKGTGSG-----FCISGRVETG---VLCLNDKVLVGASREQ 515
            |..:|...........|:.:|.::....|.|     ..|:|::..|   |:...|..:|      
  Fly   764 DFCQNMLAKRLMYSEELQATVLEVKALPGLGTTIDAILINGKLREGQTMVVAGTDGPIV------ 822

  Fly   516 AQVKSLTMN-------------EFPQTCVFAGDQVSVTLPALDINNVTVG--CIISDPQTPIPVT 565
            .|::||.|.             |:.:.....|    |.:.|.|:.....|  .:|:.....:.:.
  Fly   823 TQIRSLLMPQPMKELRVKNAYVEYKEVKAAQG----VKIAAKDLEKAIAGINLLIAHKPDEVEIC 883

  Fly   566 TRFQARII---VFNVKVPITMGFPVLLHHQSLIEPAVVCKLTASIHKST---GEVVKK 617
            |...||.:   :.::|:..| |..|.......:|..:....|:.|..|.   |.|||:
  Fly   884 TEEVARELKSALSHIKLAQT-GVHVQASTLGSLEALLEFLRTSKIPYSAIRIGPVVKR 940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_652729.2 HBS1_N 83..148 CDD:462642 12/73 (16%)
TEF1 242..669 CDD:444074 95/461 (21%)
eIF5BNP_651974.1 PRK04004 553..1129 CDD:457675 93/452 (21%)

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