DRSC/TRiP Functional Genomics Resources

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Protein Alignment HBS1 and eEF1alpha2

DIOPT Version :9

Sequence 1:NP_001286906.1 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_524611.1 Gene:eEF1alpha2 / 43736 FlyBaseID:FBgn0000557 Length:462 Species:Drosophila melanogaster


Alignment Length:442 Identity:163/442 - (36%)
Similarity:254/442 - (57%) Gaps:20/442 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 QKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVLDETGEERA 308
            :|.||:::||||||:||||..|||:|..|.:.:|.:.|.|:|::::||.||.||||||:...||.
  Fly     4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68

  Fly   309 RGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFESGFELGGQT 373
            ||||:|:...:.||....||::|||||:|||.|||:|.:|||.|:|:|.|..||||:|....|||
  Fly    69 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 133

  Fly   374 REHAILVRSLGVNQLGVVINKLDTV--GWSQDRFTEIVTKLKSFLKLAGFKDSDVSFTPCSGLTG 436
            ||||:|..:|||.||.|.:||:|:.  .:|:.|:.||..::.|::|..|:..:.|:|.|.||..|
  Fly   134 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKKIGYNPASVAFVPISGWHG 198

  Fly   437 ENLTKKAQE-PALTNW--------YSGRHLLDVIENFKIPERAIDRPLRMSVSDIYKGTGSGFCI 492
            :|:.:.::: |....|        ..|:.|:|.::....|:|..|:|||:.:.|:||..|.|...
  Fly   199 DNMLEPSEKMPWFKGWSVERKEGKAEGKCLIDALDAILPPQRPTDKPLRLPLQDVYKIGGIGTVP 263

  Fly   493 SGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVTLPALDINNVTVGCIISD 557
            .||||||:|.....|.........:|||:.|:....|....||.|...:..:.:..:..|.:..|
  Fly   264 VGRVETGLLKPGMVVNFAPVNLVTEVKSVEMHHEALTEAMPGDNVGFNVKNVSVKELRRGYVAGD 328

  Fly   558 PQ-TPIPVTTRFQARIIVFNVKVPITMGF-PVLLHHQSLIEPAVVCK---LTASIHKSTGEVVKK 617
            .: .|......|.|::||.|....|..|: |||..|.:    .:.||   :.....:.||:..:.
  Fly   329 SKNNPPRGAADFTAQVIVLNHPGQIANGYTPVLDCHTA----HIACKFSEIKEKCDRRTGKTTET 389

  Fly   618 KPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMVTKI 669
            :|:.:.:...|::.|..|:|:|:|.:.:|..|||..:|....|:|.|::..:
  Fly   390 EPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKSV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_001286906.1 HBS1_N 83..145 CDD:286079
TEF1 241..669 CDD:227581 163/440 (37%)
EF1_alpha 249..468 CDD:206670 100/229 (44%)
HBS1-like_II 474..557 CDD:293912 25/82 (30%)
HBS1_C_III 561..669 CDD:294008 31/111 (28%)
eEF1alpha2NP_524611.1 PTZ00141 1..450 CDD:185474 163/442 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464622
Domainoid 1 1.000 131 1.000 Domainoid score I241
eggNOG 1 0.900 - - E1_COG5256
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I210
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 1 1.000 - - FOG0000314
OrthoInspector 1 1.000 - - otm51361
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.900

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