DRSC/TRiP Functional Genomics Resources

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Protein Alignment HBS1 and mRRF2

DIOPT Version :10

Sequence 1:NP_652729.2 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_732771.2 Gene:mRRF2 / 42670 FlyBaseID:FBgn0051159 Length:740 Species:Drosophila melanogaster


Alignment Length:493 Identity:97/493 - (19%)
Similarity:161/493 - (32%) Gaps:178/493 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 ARQLYEKERADQKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYA 297
            :.|::::..:.:..:|.  ::.|:||||:|....:|:..|            :::.|| :.....
  Fly    21 SNQIWKRSYSSKIRNIG--ILAHIDAGKTTTTERMLFYAG------------KTRALG-EVHRGN 70

  Fly   298 WVLDETGEERARGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGE 362
            .|.|...:||.||||:.............:.|||.|||.||...:.......|..::|:|.|.|.
  Fly    71 TVTDYLTQERERGITICSSAVTFSWNDHRINLLDTPGHIDFTMEVEQSLYAVDGVVVVLDGTAGV 135

  Fly   363 FESGFELGGQTREHAILVRSLGVNQL---------------------------------GVV-IN 393
            ......:..|..:|. |.|.:.||::                                 ||: ||
  Fly   136 EAQTVTVWSQADKHK-LPRLIFVNKMDRPDADFEKCVSDLKDKLETQPVCLQYPVKNEDGVLAIN 199

  Fly   394 ---KLDTVGWSQDRFTEIVTKLKSFLKLAGFKDSDVSFTPCSGLTGENLTKKAQEPALTNWYSG- 454
               .|:.:.|.|              |..|....:|...|...|  ..|.:|..|  |.:..|| 
  Fly   200 DVITLERLSWQQ--------------KDLGRSYRNVKLEPSDDL--RLLQEKRNE--LIDQLSGL 246

  Fly   455 -RHLLDVI---ENF-KIPERAIDRPLRMSVSDIYKGTGSGFCISGRVETGVLCLNDKVLVGASRE 514
             ..|.||:   |:| .:....|:|.||.:.:                :..|:    .||:|::.:
  Fly   247 DDELADVVISTESFDNVDNALIERALRRATT----------------QQKVV----PVLLGSAYK 291

  Fly   515 QAQVKSLTMNEFPQTCVFAGDQVSVTLPALDINNVTVGC-----------IISDPQT-PIP---- 563
            ...::.|.            |.|:..|||.:..|....|           |:.|.|. |:.    
  Fly   292 NVGIQRLM------------DAVNAYLPAPEERNQIYDCFGTEVAGKVFKIVHDKQRGPLTLVRI 344

  Fly   564 -----------VTTRFQARIIVFNVKVPITMGFPVLLHHQSLIEP---------------AVVC- 601
                       ::.|.||.::                  ..|.||               .|:| 
  Fly   345 LRGEIKRGMRLISARGQAEVV------------------SKLYEPLADEYREVSAVQSGDVVICA 391

  Fly   602 --------KLTASIHKSTGEVVKKKPRCLGNNSCALVE 631
                    .|..|...:.....|:..:.|||.:..:.|
  Fly   392 GLKSTVTGDLLTSSQSALKNAQKRYKQSLGNTAAKVEE 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_652729.2 HBS1_N 83..148 CDD:462642
TEF1 242..669 CDD:444074 96/484 (20%)
mRRF2NP_732771.2 FusA 30..734 CDD:440248 96/484 (20%)
Blue background indicates that the domain is not in the aligned region.

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