DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HBS1 and si:dkey-37o8.1

DIOPT Version :9

Sequence 1:NP_001286906.1 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001157466.1 Gene:si:dkey-37o8.1 / 407641 ZFINID:ZDB-GENE-030131-5667 Length:458 Species:Danio rerio


Alignment Length:447 Identity:162/447 - (36%)
Similarity:252/447 - (56%) Gaps:26/447 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 ADQKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVLDETGEE 306
            |.::.||::::|||||.||||..|||:|..|.:..|.:.|:|:.:.::||.||.||||||:...|
Zfish     2 AKERIHINLVIIGHVDGGKSTTTGHLVYKCGGIDHRTIEKYEKAATQMGKSSFKYAWVLDKLKAE 66

  Fly   307 RARGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFESGFELGG 371
            |.||||:|:...:..|:....|::|||||:|||.|||:|.:|||.|||:|.|.:||||:|....|
Zfish    67 RERGITIDISLLKFNTQKYTFTIIDAPGHRDFIKNMITGTSQADAALLIVSAAKGEFEAGISRNG 131

  Fly   372 QTREHAILVRSLGVNQLGVVINKLDTV--GWSQDRFTEIVTKLKSFLKLAGFKDSDVSFTPCSGL 434
            ||||||:|..:|||.||.|.:||:|..  .:||.|:.|:|..:..|:|..||:...|.|.|.||.
Zfish   132 QTREHALLAYTLGVKQLVVCVNKMDLTEPPFSQKRYDEVVRNVSVFVKKIGFEIGAVPFIPISGW 196

  Fly   435 TGENLTKKAQEPALTNWYS------------GRHLLDVIENFKIPERAIDRPLRMSVSDIYKGTG 487
            :|||:...:|:   ..|:.            ||.||:|:::...|.|...:|||:.:.|:||..|
Zfish   197 SGENMIVPSQK---MQWFKGWKLKRKEGHCHGRTLLEVLDSLHPPVRNAGKPLRLPLQDVYKIGG 258

  Fly   488 SGFCISGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVTLPALDINNVTVG 552
            .|....|::|||||.....:....::..|:|||:.|:.........|..|...:..:.:.|:..|
Zfish   259 VGTVPVGKIETGVLKPGMVLTFSPAKLTAEVKSIEMHHQGLQTALPGHNVGFNIKNVSVKNLRRG 323

  Fly   553 CIISDPQTPIPV-TTRFQARIIVFNVKVPITMGF-PVLLHHQSLIEPAVVCK---LTASIHKSTG 612
            .:..:.|...|. .:.|.|:||:.|....|.:|: |||..|.:    .|.|:   |...:.:.:|
Zfish   324 DVAGNAQQDPPSDVSSFIAQIIMLNHPGKIKVGYSPVLDCHTT----HVSCRFAELREKLDRRSG 384

  Fly   613 EVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMVTKI 669
            ..::..|:.|.:...|.|:|..::|:|:|.:..:..|||..:|....|:|.|::..:
Zfish   385 RKLESWPQYLRSGDGATVKLVPNKPLCVESFFHYPPLGRFAVRDLKQTVAVGVIKSV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_001286906.1 HBS1_N 83..145 CDD:286079
TEF1 241..669 CDD:227581 162/445 (36%)
EF1_alpha 249..468 CDD:206670 102/232 (44%)
HBS1-like_II 474..557 CDD:293912 23/82 (28%)
HBS1_C_III 561..669 CDD:294008 31/112 (28%)
si:dkey-37o8.1NP_001157466.1 PTZ00141 1..458 CDD:185474 162/447 (36%)
EF1_alpha 9..239 CDD:206670 102/232 (44%)
EF1_alpha_II 244..332 CDD:293894 24/87 (28%)
EF1_alpha_III 337..438 CDD:294004 30/104 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5256
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 1 1.000 - - FOG0000314
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.