DRSC/TRiP Functional Genomics Resources

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Protein Alignment HBS1 and waw

DIOPT Version :10

Sequence 1:NP_652729.2 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001027089.1 Gene:waw / 3771960 FlyBaseID:FBgn0024182 Length:696 Species:Drosophila melanogaster


Alignment Length:527 Identity:124/527 - (23%)
Similarity:193/527 - (36%) Gaps:149/527 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 GDDISRSSATVFKVSKEQAVRNAR-------QLYEKERAD-QKSHIHM--------IVIGHVDAG 259
            ||  .|.||.:...||...|||..       :..|..:|| .:...||        .:|.|||.|
  Fly    49 GD--KRHSAWLVARSKSLLVRNLSTTNQVKGETEEPSQADLLREFAHMPVERIRNFSIIAHVDHG 111

  Fly   260 KSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVLDETGEERARGITMDVGQSRIETKT 324
            ||||...||..||.:: |...:|:               |||....||.||||:....:.|..:.
  Fly   112 KSTLADRLLELTGAIA-RNGGQHQ---------------VLDNLQVERERGITVKAQTASIFHRH 160

  Fly   325 K----IVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFESGFELGGQTREHAILVRSLGV 385
            |    ::.|:|.|||.||...:.......|..:|:|||..|       :..||..:..|.:.   
  Fly   161 KGQLYLLNLIDTPGHVDFSNEVSRSLAACDGVVLLVDACHG-------VQAQTVANYHLAKQ--- 215

  Fly   386 NQLGV--VINKLDTVGWSQDRFTEIVTKLKSFLKLAGFKDSDVSFTPCSGLTGENLTKKAQEPAL 448
            .||.|  |:||:|....:.|   ::...||   .|.|....:|  ...|...|..:::..:.   
  Fly   216 RQLAVVPVLNKIDIKHANPD---QVCQDLK---LLFGIDPDEV--LRVSAKLGTGVSEVLER--- 269

  Fly   449 TNWYSGRHLLDVIENFKIPERAIDRPLRMSVSDI----YKGT-GSGFCISGRVETGVLCLNDKVL 508
                       |||....|:...|...|..:.|.    |:|. ...:.::|::|.     |..:.
  Fly   270 -----------VIETVPPPQVQRDSDFRALIFDSWFDKYRGALNLIYVLNGKLEQ-----NQDIQ 318

  Fly   509 VGASREQAQVKSLTM---NEFPQTCVFAGDQVSVTLPALDINNVTVGCIISD------------- 557
            ..|:::...|||:::   .|.|...|.||   .|.|.|.::.| :...|:.|             
  Fly   319 SLATKKVYSVKSISVLRPAECPVPDVSAG---QVGLIACNMRN-SKESIVGDTIHLKNQAVAAAG 379

  Fly   558 ---PQTPI------------PVTTRFQARIIVFN-----VKVPIT--------MGFPVLLHHQSL 594
               ||.|:            .|..|.....:|.|     ||:..:        :||..|||.:  
  Fly   380 SYRPQQPLVFAGVFPADQSKHVALRSAIDKMVLNDSAVTVKIDSSPALGQGWRLGFLGLLHME-- 442

  Fly   595 IEPAVVCKLTASIHKS---------TGEVVKKKPRCLGNNSCALVELETS----RPICIERYADF 646
                |.|:.....|.:         |..:|...|:.:.......:::..:    .|..|:.|.:.
  Fly   443 ----VFCQRLEQEHGAEPIITAPSVTYRLVLSNPKMIKQQGRDTMDISNAALFPEPHSIKEYYEP 503

  Fly   647 KELGRVM 653
            ..||.::
  Fly   504 LVLGTII 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_652729.2 HBS1_N 83..148 CDD:462642
TEF1 242..669 CDD:444074 113/489 (23%)
wawNP_001027089.1 LepA 94..695 CDD:440249 110/480 (23%)
Blue background indicates that the domain is not in the aligned region.

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