DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HBS1 and eef1a1a

DIOPT Version :9

Sequence 1:NP_001286906.1 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_956303.1 Gene:eef1a1a / 336334 ZFINID:ZDB-GENE-030131-8278 Length:462 Species:Danio rerio


Alignment Length:442 Identity:162/442 - (36%)
Similarity:255/442 - (57%) Gaps:26/442 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 QKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVLDETGEERA 308
            :|.||:::||||||:||||..|||:|..|.:.:|.:.|.|:|:.::||.||.||||||:...||.
Zfish     4 EKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68

  Fly   309 RGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFESGFELGGQT 373
            ||||:|:...:.||....||::|||||:|||.|||:|.:|||.|:|:|.|..||||:|....|||
Zfish    69 RGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQT 133

  Fly   374 REHAILVRSLGVNQLGVVINKLDTV--GWSQDRFTEIVTKLKSFLKLAGFKDSDVSFTPCSGLTG 436
            ||||:|..:|||.||.|.:||:|:.  .:||.|:.|||.::.:::|..|:....|:|.|.||..|
Zfish   134 REHALLAYTLGVKQLIVGVNKMDSTEPSYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNG 198

  Fly   437 ENLTKKAQEPALTNWY------------SGRHLLDVIENFKIPERAIDRPLRMSVSDIYKGTGSG 489
            :|:.:.:..   .:|:            :|..||:.::..:.|.|..|:|||:.:.|:||..|.|
Zfish   199 DNMLEASPN---MSWFKGWKITRKEGNAAGTTLLEALDAIQPPTRPTDKPLRLPLQDVYKIGGIG 260

  Fly   490 FCISGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVTLPALDINNVTVGCI 554
            ....||||||:|.....|.........:|||:.|:....:....||.|...:..:.:.::..|.:
Zfish   261 TVPVGRVETGLLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNV 325

  Fly   555 ISDPQT-PIPVTTRFQARIIVFNVKVPITMGF-PVLLHHQSLIEPAVVCK---LTASIHKSTGEV 614
            ..|.:. |......|.|::|:.|....|:.|: |||..|.:    .:.||   |...|.:.:|:.
Zfish   326 AGDSKNDPPQEAANFTAQVIILNHPGQISAGYAPVLDCHTA----HIACKFAELKEKIDRRSGKK 386

  Fly   615 VKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMV 666
            ::..|:.|.:...|:||:...:|:|:|.::::..|||..:|....|:|.|::
Zfish   387 LEDNPKSLKSGDAAIVEMIPGKPMCVESFSEYPPLGRFAVRDMRQTVAVGVI 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_001286906.1 HBS1_N 83..145 CDD:286079
TEF1 241..669 CDD:227581 162/442 (37%)
EF1_alpha 249..468 CDD:206670 100/232 (43%)
HBS1-like_II 474..557 CDD:293912 24/82 (29%)
HBS1_C_III 561..669 CDD:294008 31/110 (28%)
eef1a1aNP_956303.1 PTZ00141 1..460 CDD:185474 162/442 (37%)
EF1_alpha 9..238 CDD:206670 100/231 (43%)
EF1_alpha_II 242..332 CDD:293894 26/89 (29%)
EF1_alpha_III 336..438 CDD:294004 30/105 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5256
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 1 1.000 - - FOG0000314
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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