DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HBS1 and GSPT1

DIOPT Version :10

Sequence 1:NP_652729.2 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_002085.3 Gene:GSPT1 / 2935 HGNCID:4621 Length:637 Species:Homo sapiens


Alignment Length:582 Identity:190/582 - (32%)
Similarity:305/582 - (52%) Gaps:57/582 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LDEILNEETNKSAKPAVNKMKAPAAPVLPKTVSKTVPTPPPKISLKEPR--------RGFEIPSP 191
            |....:.:.|.:|||.|..:.  ||..:|..:......|||........        |...:.|.
Human    61 LSAAFSRQLNVNAKPFVPNVH--AAEFVPSFLRGPAAPPPPVGGAANNHGAGSGAGGRAAPVESS 123

  Fly   192 KVPSSPVVSGRNTPVDISAGDDISRSSATVFKVSKEQA-----------------------VRNA 233
            :...| :..|.|:.|.:...:.|..:..|  ::|.|::                       ..:|
Human   124 QEEQS-LCEGSNSAVSMELSEPIVENGET--EMSPEESWEHKEEISEAEPGGGSLGDGRPPEESA 185

  Fly   234 RQLYEKER-------------ADQKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQE 285
            .::.|:|.             |.:|.|::::.||||||||||:.|.::|.||.|.:|.:.|:|:|
Human   186 HEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYERE 250

  Fly   286 SKKLGKQSFMYAWVLDETGEERARGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQAD 350
            :|:..::::..:|.||...|||.:|.|::||::..||:.|..|:|||||||.|:||||.||:|||
Human   251 AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQAD 315

  Fly   351 VALLVVDATRGEFESGFELGGQTREHAILVRSLGVNQLGVVINKLD--TVGWSQDRFTEIVTKLK 413
            :|:||:.|.:||||:|||.||||||||:|.::.||..|.|:|||:|  ||.||.:|:.|...||.
Human   316 LAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLV 380

  Fly   414 SFLKLAGFK-DSDVSFTPCSGLTGENLTKKAQEPALTNWYSGRHLLDVIENFKIPERAIDRPLRM 477
            .|||..||. ..|:.|.|||||||.||.:::.   ...||.|...:..::|.....|::|.|:|:
Human   381 PFLKKVGFNPKKDIHFMPCSGLTGANLKEQSD---FCPWYIGLPFIPYLDNLPNFNRSVDGPIRL 442

  Fly   478 SVSDIYKGTGSGFCISGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVTLP 542
            .:.|.||..|:  .:.|::|:|.:|...::::..::...:|..:..::.....|..|:.:.:.|.
Human   443 PIVDKYKDMGT--VVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLK 505

  Fly   543 ALDINNVTVGCIISDPQTPIPVTTRFQARIIVFNVKVPITMGFPVLLHHQSLIEPAVVCKLTASI 607
            .::...:..|.|:.||.........|.|:|::...|..|..|:..:||..:.||...:..|...:
Human   506 GIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLV 570

  Fly   608 HKSTGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMVTKI 669
            .|.:||..|.:||.:..:...:..|.|:..||:|.:.||.::||..||..|.|||.|.|.|:
Human   571 DKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKL 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_652729.2 HBS1_N 83..148 CDD:462642 2/12 (17%)
TEF1 242..669 CDD:444074 164/429 (38%)
GSPT1NP_002085.3 PAM2 65..81 CDD:429316 5/15 (33%)
TEF1 207..636 CDD:444074 165/431 (38%)

Return to query results.
Submit another query.