DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HBS1 and GSPT1

DIOPT Version :9

Sequence 1:NP_001286906.1 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_002085.3 Gene:GSPT1 / 2935 HGNCID:4621 Length:637 Species:Homo sapiens


Alignment Length:582 Identity:190/582 - (32%)
Similarity:305/582 - (52%) Gaps:57/582 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LDEILNEETNKSAKPAVNKMKAPAAPVLPKTVSKTVPTPPPKISLKEPR--------RGFEIPSP 191
            |....:.:.|.:|||.|..:.  ||..:|..:......|||........        |...:.|.
Human    61 LSAAFSRQLNVNAKPFVPNVH--AAEFVPSFLRGPAAPPPPVGGAANNHGAGSGAGGRAAPVESS 123

  Fly   192 KVPSSPVVSGRNTPVDISAGDDISRSSATVFKVSKEQA-----------------------VRNA 233
            :...| :..|.|:.|.:...:.|..:..|  ::|.|::                       ..:|
Human   124 QEEQS-LCEGSNSAVSMELSEPIVENGET--EMSPEESWEHKEEISEAEPGGGSLGDGRPPEESA 185

  Fly   234 RQLYEKER-------------ADQKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQE 285
            .::.|:|.             |.:|.|::::.||||||||||:.|.::|.||.|.:|.:.|:|:|
Human   186 HEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYERE 250

  Fly   286 SKKLGKQSFMYAWVLDETGEERARGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQAD 350
            :|:..::::..:|.||...|||.:|.|::||::..||:.|..|:|||||||.|:||||.||:|||
Human   251 AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQAD 315

  Fly   351 VALLVVDATRGEFESGFELGGQTREHAILVRSLGVNQLGVVINKLD--TVGWSQDRFTEIVTKLK 413
            :|:||:.|.:||||:|||.||||||||:|.::.||..|.|:|||:|  ||.||.:|:.|...||.
Human   316 LAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLV 380

  Fly   414 SFLKLAGFK-DSDVSFTPCSGLTGENLTKKAQEPALTNWYSGRHLLDVIENFKIPERAIDRPLRM 477
            .|||..||. ..|:.|.|||||||.||.:::.   ...||.|...:..::|.....|::|.|:|:
Human   381 PFLKKVGFNPKKDIHFMPCSGLTGANLKEQSD---FCPWYIGLPFIPYLDNLPNFNRSVDGPIRL 442

  Fly   478 SVSDIYKGTGSGFCISGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVTLP 542
            .:.|.||..|:  .:.|::|:|.:|...::::..::...:|..:..::.....|..|:.:.:.|.
Human   443 PIVDKYKDMGT--VVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLK 505

  Fly   543 ALDINNVTVGCIISDPQTPIPVTTRFQARIIVFNVKVPITMGFPVLLHHQSLIEPAVVCKLTASI 607
            .::...:..|.|:.||.........|.|:|::...|..|..|:..:||..:.||...:..|...:
Human   506 GIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLV 570

  Fly   608 HKSTGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMVTKI 669
            .|.:||..|.:||.:..:...:..|.|:..||:|.:.||.::||..||..|.|||.|.|.|:
Human   571 DKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKL 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_001286906.1 HBS1_N 83..145 CDD:286079 1/9 (11%)
TEF1 241..669 CDD:227581 164/443 (37%)
EF1_alpha 249..468 CDD:206670 107/221 (48%)
HBS1-like_II 474..557 CDD:293912 16/82 (20%)
HBS1_C_III 561..669 CDD:294008 34/107 (32%)
GSPT1NP_002085.3 PAM2 64..81 CDD:284542 5/16 (31%)
TEF1 210..634 CDD:227581 164/428 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5256
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.