DRSC/TRiP Functional Genomics Resources

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Protein Alignment HBS1 and Eef1a2

DIOPT Version :9

Sequence 1:NP_001286906.1 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_036792.2 Gene:Eef1a2 / 24799 RGDID:3781 Length:463 Species:Rattus norvegicus


Alignment Length:442 Identity:160/442 - (36%)
Similarity:255/442 - (57%) Gaps:20/442 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 QKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVLDETGEERA 308
            :|:||:::||||||:||||..|||:|..|.:.:|.:.|.|:|:.::||.||.||||||:...||.
  Rat     4 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68

  Fly   309 RGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFESGFELGGQT 373
            ||||:|:...:.||....:|::|||||:|||.|||:|.:|||.|:|:|.|..||||:|....|||
  Rat    69 RGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQT 133

  Fly   374 REHAILVRSLGVNQLGVVINKLDTV--GWSQDRFTEIVTKLKSFLKLAGFKDSDVSFTPCSGLTG 436
            ||||:|..:|||.||.|.:||:|:.  .:|:.|:.|||.::.:::|..|:..:.|.|.|.||..|
  Rat   134 REHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHG 198

  Fly   437 ENLTKKAQE-PALTNW--------YSGRHLLDVIENFKIPERAIDRPLRMSVSDIYKGTGSGFCI 492
            :|:.:.:.. |....|        .||..||:.::....|.|..|:|||:.:.|:||..|.|...
  Rat   199 DNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVP 263

  Fly   493 SGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVTLPALDINNVTVGCIISD 557
            .||||||:|.....|.........:|||:.|:....:....||.|...:..:.:.::..|.:..|
  Rat   264 VGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGD 328

  Fly   558 PQT-PIPVTTRFQARIIVFNVKVPITMGF-PVLLHHQSLIEPAVVCK---LTASIHKSTGEVVKK 617
            .:. |.....:|.:::|:.|....|:.|: ||:..|.:    .:.||   |...|.:.:|:.::.
  Rat   329 SKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTA----HIACKFAELKEKIDRRSGKKLED 389

  Fly   618 KPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMVTKI 669
            .|:.|.:...|:||:...:|:|:|.::.:..|||..:|....|:|.|::..:
  Rat   390 NPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_001286906.1 HBS1_N 83..145 CDD:286079
TEF1 241..669 CDD:227581 160/440 (36%)
EF1_alpha 249..468 CDD:206670 100/229 (44%)
HBS1-like_II 474..557 CDD:293912 24/82 (29%)
HBS1_C_III 561..669 CDD:294008 29/111 (26%)
Eef1a2NP_036792.2 PTZ00141 1..460 CDD:185474 160/442 (36%)
G1. /evidence=ECO:0000250 14..21 5/6 (83%)
G2. /evidence=ECO:0000250 70..74 3/3 (100%)
G3. /evidence=ECO:0000250 91..94 2/2 (100%)
G4. /evidence=ECO:0000250 153..156 2/2 (100%)
G5. /evidence=ECO:0000250 194..196 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..463
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5256
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 1 1.000 - - FOG0000314
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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