DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HBS1 and eef-1A.2

DIOPT Version :9

Sequence 1:NP_001286906.1 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_509323.1 Gene:eef-1A.2 / 181044 WormBaseID:WBGene00001169 Length:463 Species:Caenorhabditis elegans


Alignment Length:442 Identity:168/442 - (38%)
Similarity:254/442 - (57%) Gaps:20/442 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 QKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVLDETGEERA 308
            :|.||:::||||||:||||..|||:|..|.:.:|.:.|.|:|::::||.||.||||||:...||.
 Worm     4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68

  Fly   309 RGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFESGFELGGQT 373
            ||||:|:...:.||....:|::|||||:|||.|||:|.:|||.|:|||....||||:|....|||
 Worm    69 RGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQT 133

  Fly   374 REHAILVRSLGVNQLGVVINKLDTV--GWSQDRFTEIVTKLKSFLKLAGFKDSDVSFTPCSGLTG 436
            ||||:|.::|||.||.|..||:|:.  .:|:.|||||..::..|:|..|:....|.|.|.||..|
 Worm   134 REHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNG 198

  Fly   437 ENLTK-KAQEPALTNW--------YSGRHLLDVIENFKIPERAIDRPLRMSVSDIYKGTGSGFCI 492
            :|:.: .:..|....|        .||:.||:.:::...|:|..|||||:.:.|:||..|.|...
 Worm   199 DNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVP 263

  Fly   493 SGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVTLPALDINNVTVGCIISD 557
            .||||||::.....|.........:|||:.|:.........||.|...:..:.:.::..|.:.||
 Worm   264 VGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSD 328

  Fly   558 -PQTPIPVTTRFQARIIVFNVKVPITMGF-PVLLHHQSLIEPAVVCK---LTASIHKSTGEVVKK 617
             .|.|......|.|::|:.|....|:.|: |||..|.:    .:.||   |...:.:.||:.|:.
 Worm   329 SKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTA----HIACKFNELKEKVDRRTGKKVED 389

  Fly   618 KPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMVTKI 669
            .|:.|.:....:|||..::|:|:|.:.|:..|||..:|....|:|.|::..:
 Worm   390 FPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_001286906.1 HBS1_N 83..145 CDD:286079
TEF1 241..669 CDD:227581 168/440 (38%)
EF1_alpha 249..468 CDD:206670 102/229 (45%)
HBS1-like_II 474..557 CDD:293912 23/82 (28%)
HBS1_C_III 561..669 CDD:294008 33/111 (30%)
eef-1A.2NP_509323.1 PTZ00141 1..461 CDD:185474 168/442 (38%)
EF1_alpha 9..239 CDD:206670 102/229 (45%)
EF1_alpha_II 242..332 CDD:293894 27/89 (30%)
EF1_alpha_III 335..438 CDD:294004 32/106 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 1 1.000 - - FOG0000314
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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