DRSC/TRiP Functional Genomics Resources

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Protein Alignment HBS1 and Gspt1

DIOPT Version :9

Sequence 1:NP_001286906.1 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_666178.2 Gene:Gspt1 / 14852 MGIID:1316728 Length:636 Species:Mus musculus


Alignment Length:576 Identity:189/576 - (32%)
Similarity:299/576 - (51%) Gaps:46/576 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LDEILNEETNKSAKPAV----------NKMKAPAAPVLPKT----------VSKTVPTPPPKISL 179
            |....:.:.|.:|||.|          :.::.||.|.|...          .....|:.|.:.|.
Mouse    61 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQPPLSPAGAAGGDHGAGSGAGGPSEPVESSQ 125

  Fly   180 KEPRRGFEIPSPKVPSSPVVSGRNT------------------PVDISAGDDISRSSATVFKVSK 226
            .:...|.........|.|||....|                  |...|:||......:|...:.:
Mouse   126 DQSCEGSNSTVSMELSEPVVENGETEMSPEESWEHKEEISEAEPGGGSSGDGRPPEESTQEMMEE 190

  Fly   227 EQAVRNARQLYEKERADQKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGK 291
            |:.:...:.......|.:|.|::::.||||||||||:.|.::|.||.|.:|.:.|:|:|:|:..:
Mouse   191 EEEIPKPKSAVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNR 255

  Fly   292 QSFMYAWVLDETGEERARGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVV 356
            :::..:|.||...|||.:|.|::||::..||:.|..|:|||||||.|:||||.||:|||:|:||:
Mouse   256 ETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVI 320

  Fly   357 DATRGEFESGFELGGQTREHAILVRSLGVNQLGVVINKLD--TVGWSQDRFTEIVTKLKSFLKLA 419
            .|.:||||:|||.||||||||:|.::.||..|.|:|||:|  ||.||.:|:.|...||..|||..
Mouse   321 SARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKV 385

  Fly   420 GFK-DSDVSFTPCSGLTGENLTKKAQEPALTNWYSGRHLLDVIENFKIPERAIDRPLRMSVSDIY 483
            ||. ..|:.|.|||||||.||.:::.   ...||.|...:..::|.....|::|.|:|:.:.|.|
Mouse   386 GFNPKKDIHFMPCSGLTGANLKEQSD---FCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKY 447

  Fly   484 KGTGSGFCISGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVTLPALDINN 548
            |..|:  .:.|::|:|.:|...::::..::...:|..:..::.....|..|:.:.:.|..::...
Mouse   448 KDMGT--VVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEE 510

  Fly   549 VTVGCIISDPQTPIPVTTRFQARIIVFNVKVPITMGFPVLLHHQSLIEPAVVCKLTASIHKSTGE 613
            :..|.|:.|..........|.|:|::...|..|..|:..:||..:.||...:..|...:.|.:||
Mouse   511 ILPGFILCDLNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGE 575

  Fly   614 VVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMVTKI 669
            ..|.:||.:..:...:..|.|:..||:|.:.||.::||..||..|.|||.|.|.|:
Mouse   576 KSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKL 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_001286906.1 HBS1_N 83..145 CDD:286079 1/9 (11%)
TEF1 241..669 CDD:227581 163/430 (38%)
EF1_alpha 249..468 CDD:206670 107/221 (48%)
HBS1-like_II 474..557 CDD:293912 16/82 (20%)
HBS1_C_III 561..669 CDD:294008 34/107 (32%)
Gspt1NP_666178.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54
PAM2 64..81 CDD:284542 5/16 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..206 19/115 (17%)
TEF1 209..633 CDD:227581 163/428 (38%)
EF1_alpha 213..429 CDD:206670 107/218 (49%)
G1. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 218..225 6/6 (100%)
G2. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 274..278 2/3 (67%)
G3. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 295..298 2/2 (100%)
G4. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 357..360 2/2 (100%)
G5. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 399..401 1/1 (100%)
eRF3_II 438..519 CDD:293906 16/82 (20%)
eRF3_C_III 525..631 CDD:294003 34/105 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5256
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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