DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HBS1 and eef1a1b

DIOPT Version :9

Sequence 1:NP_001286906.1 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001017795.1 Gene:eef1a1b / 100004503 ZFINID:ZDB-GENE-050417-327 Length:462 Species:Danio rerio


Alignment Length:442 Identity:164/442 - (37%)
Similarity:257/442 - (58%) Gaps:26/442 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 QKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVLDETGEERA 308
            :|.||:::||||||:||||..|||:|..|.:.:|.:.|.|:|:.::||.||.||||||:...||.
Zfish     4 EKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68

  Fly   309 RGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFESGFELGGQT 373
            ||||:|:...:.||....||::|||||:|||.|||:|.:|||.|:|:|.|..||||:|....|||
Zfish    69 RGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQT 133

  Fly   374 REHAILVRSLGVNQLGVVINKLDTV--GWSQDRFTEIVTKLKSFLKLAGFKDSDVSFTPCSGLTG 436
            ||||:|..:|||.||.|.:||:|:.  .:||.|:.|||.::.:::|..|:....|:|.|.||..|
Zfish   134 REHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNG 198

  Fly   437 ENLTKKAQEPALTNWY------------SGRHLLDVIENFKIPERAIDRPLRMSVSDIYKGTGSG 489
            :|:.:.:  |.:| |:            ||..||:.::..:.|.|..|:|||:.:.|:||..|.|
Zfish   199 DNMLEAS--PNMT-WFKGWKITRKDGSSSGTTLLEALDAIQPPTRPTDKPLRLPLQDVYKIGGIG 260

  Fly   490 FCISGRVETGVLCLNDKVLVGASREQAQVKSLTMNEFPQTCVFAGDQVSVTLPALDINNVTVGCI 554
            ....||||||:|.....|.........:|||:.|:....:....||.|...:..:.:.::..|.:
Zfish   261 TVPVGRVETGILKPGLVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNV 325

  Fly   555 ISDPQT-PIPVTTRFQARIIVFNVKVPITMGF-PVLLHHQSLIEPAVVCK---LTASIHKSTGEV 614
            ..|.:. |......|.|::|:.|....|:.|: |||..|.:    .:.||   |...|.:.:|:.
Zfish   326 AGDSKNDPPQEAASFTAQVIILNHPGQISAGYAPVLDCHTA----HIACKFAELKEKIDRRSGKK 386

  Fly   615 VKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMV 666
            ::..|:.|.:...|:|::...:|:|:|.::::..|||..:|....|:|.|::
Zfish   387 LEDNPKSLKSGDAAIVDMIPGKPMCVESFSEYPPLGRFAVRDMRQTVAVGVI 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HBS1NP_001286906.1 HBS1_N 83..145 CDD:286079
TEF1 241..669 CDD:227581 164/442 (37%)
EF1_alpha 249..468 CDD:206670 103/232 (44%)
HBS1-like_II 474..557 CDD:293912 24/82 (29%)
HBS1_C_III 561..669 CDD:294008 30/110 (27%)
eef1a1bNP_001017795.1 PTZ00141 1..460 CDD:185474 164/442 (37%)
EF1_alpha 9..238 CDD:206670 103/231 (45%)
EF1_alpha_II 242..332 CDD:293894 26/89 (29%)
EF1_alpha_III 336..438 CDD:294004 29/105 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.