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Protein Alignment FASN2 and Ptgr2

DIOPT Version :9

Sequence 1:	NP_001259986.1	Gene:	FASN2 / 117361	FlyBaseID:	FBgn0042627	Length:	2410	Species:	Drosophila melanogaster
Sequence 2:	NP_001239554.1	Gene:	Ptgr2 / 77219	MGIID:	1916372	Length:	351	Species:	Mus musculus

Alignment Length:	458	Identity:	84/458 - (18%)
Similarity:	141/458 - (30%)	Gaps:	180/458 - (39%)

- Green bases have known domain annotations that are detailed below.

  Fly  1340 LKNSIAKAQAEEKNLYLVAQGEPNSGALGLMNCLKREAGGHFLRLYLILDEGVPQFSLDDPFYAA 1404
            |.:::.:.|.:.:.|||..  :|      .|.|...|            |.|....:   |:..|
Mouse    30 LPDALNEGQVQVRTLYLSV--DP------YMRCKMNE------------DTGTDYLA---PWQLA 71

  Fly  1405 QLAKDLVVNVYRNGSWGSYRHLKMESRPPMLPVEQAYVNTLVKGDLSSLRWIESPRSSPIQSQLE 1469
            |:|....:.|                      ||::....|.|||.
Mouse    72 QVADGGGIGV----------------------VEESKHQKLTKGDF------------------- 95

  Fly  1470 PCTVYYAPLNFRDVMLASG--KLGVDALPGDLAY---------QDCVLGLEFAGRDSCGRRVMAM 1523
             .|.:|.|...:.::..:|  |:....:.|.|:|         ...::|::..|..|.|
Mouse    96 -VTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAG------ 153

  Fly  1524 VTAKSLATNCLANRNLLWEVPSKWTMEQASTVPCVYATVYYALVVRGQMKEGERILIHAGSGGVG 1588
                                 |..||                 ||.|            .:|..|
Mouse   154 ---------------------SNQTM-----------------VVSG------------AAGACG 168

  Fly  1589 QAAISVALAHGLT-VFTTVGSKEKREFLLKRFPKLKAKN--IGNSRDTSFEQLIMSETHGNGVEL 1650
            ..|..:....|.: |....|::||..||........|.|  .||..    |||  .|....||::
Mouse   169 SLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVA----EQL--REACPGGVDV 227

  Fly  1651 VLNSLSEEKLQASIRCLALNGRFLEIGKF-DLSNNTPL--------------------GMSVFLK 1694
            ..:::..:...|.|..:..|...:..|:. ..||:.|.                    ..:|...
Mouse   228 YFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPYPPPLPPAVEAIRKERNITRERFTVLNY 292

  Fly  1695 NTSFH-GILLDSVMEGEEEMQLMVAKLVAEGIKSGAVQPLPTTVFAEQEIEKAFRFMASGKHIGK 1758
            ...|. |||  .:.:..:|.:|.|.:.:|:|:::..|               ||:.|.:|.::||
Mouse   293 KDKFEPGIL--QLSQWFKEGKLKVKETMAKGLENMGV---------------AFQSMMTGGNVGK 340

  Fly  1759 VVI 1761
            .::
Mouse   341 QIV 343

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.