DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pcyt1 and Pcyt2

DIOPT Version :10

Sequence 1:NP_647621.1 Gene:Pcyt1 / 117353 FlyBaseID:FBgn0041342 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_446020.1 Gene:Pcyt2 / 89841 RGDID:619970 Length:404 Species:Rattus norvegicus


Alignment Length:273 Identity:75/273 - (27%)
Similarity:120/273 - (43%) Gaps:78/273 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 GQTTRRVRVYADGIYDLFHQGHARQLMQAKNIFPNVYLIVGVCNDELTHRMKGRTVMNGFERYEG 264
            ||  |.|||:.||.||:.|.||:.||.||:.:  ..||||||..||...:.||..|....|||:.
  Rat    19 GQ--RTVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPVFTQEERYKM 79

  Fly   265 VRHCRYVDEIVQNAPWTLSDEFIADNKIDFVAH-DDIPYVTDGMDDIYAPLKARGMFVATERTEG 328
            |:..::|||:|..||:..:.|.:..:..||..| :||....||. |.|..:|..|.:...:||:|
  Rat    80 VQAIKWVDEVVPAAPYVTTLETLDKHNCDFCVHGNDITLTVDGR-DTYEEVKQAGRYRECKRTQG 143

  Fly   329 VSTSDIVARIVKDYDLYVRRNLARGYSAKELNVSFLSEKKFRLQNKMDELKSRGKRELSKVKVDI 393
            |||:|:|.|::    |..:.:    :|::|::..:                              
  Rat   144 VSTTDLVGRML----LVTKAH----HSSQEMSSEY------------------------------ 170

  Fly   394 ITKWEEKSREFIDTFLLLFGRENLNHLWNESKGKLLQALSPPGSPSGSVNGDDTE----GGEDYS 454
                    ||:.|:|                 ||     .|..:|:|.....:..    ||:...
  Rat   171 --------REYADSF-----------------GK-----PPHPTPAGDTLSSEVSSQCPGGQSPW 205

  Fly   455 ETIDEYLEMAEKL 467
            ..:.::|:.::|:
  Rat   206 TGVSQFLQTSQKI 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pcyt1NP_647621.1 CCT 204..353 CDD:173925 58/149 (39%)
Pcyt2NP_446020.1 PTZ00308 22..390 CDD:140329 72/268 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..201 7/49 (14%)

Return to query results.
Submit another query.