DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcyt1 and PCT1

DIOPT Version :9

Sequence 1:NP_001261264.1 Gene:Pcyt1 / 117353 FlyBaseID:FBgn0041342 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_011718.1 Gene:PCT1 / 853116 SGDID:S000003434 Length:424 Species:Saccharomyces cerevisiae


Alignment Length:347 Identity:121/347 - (34%)
Similarity:182/347 - (52%) Gaps:72/347 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 TTRRVRVYADGIYDLFHQGHARQLMQAKNIFPNVYLIVGVCNDELTHRMKGRTVMNGFERYEGVR 266
            |.|.:|:||||::||||.||.:||.|.|..||||.|||||.:|::||::||.||:...:|.|.:.
Yeast   100 TDRPIRIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGLTVLTDKQRCETLT 164

  Fly   267 HCRYVDEIVQNAPWTLSDEFIADNKIDFVAHDDIPYVTDGMDDIYAPLKARGMFVATERTEGVST 331
            |||:|||:|.||||.::.||:.::|||:|||||||||:...||||.|:|..|.|:.|:||.||||
Yeast   165 HCRWVDEVVPNAPWCVTPEFLLEHKIDYVAHDDIPYVSADSDDIYKPIKEMGKFLTTQRTNGVST 229

  Fly   332 SDIVARIVKDYDLYVRRNLARGYSAKELNVSFLSEKKFRLQNKMDEL------------------ 378
            |||:.:|::|||.|:.||.|||.:.:|||||:|.:.:...:..::|.                  
Yeast   230 SDIITKIIRDYDKYLMRNFARGATRQELNVSWLKKNELEFKKHINEFRSYFKKNQTNLNNASRDL 294

  Fly   379 ----------KSRGKRELSKVKVDIITKWEEKSREFIDTFLLLFGRENLNHLWNESKGKLLQALS 433
                      |:.||:..||:..:.:.|..::.|:             .|.|.:....||::..|
Yeast   295 YFEVREILLKKTLGKKLYSKLIGNELKKQNQRQRK-------------QNFLDDPFTRKLIREAS 346

  Fly   434 PPGSPSGSVNGDDT------EGGEDYSETIDEYLEMAEKLSGGSGSGSSGSLNGKQRPKQKRSSL 492
            |....:....|:::      :.|..:|:..||     :..|..:.:.|....|            
Yeast   347 PATEFANEFTGENSTAKSPDDNGNLFSQEDDE-----DTNSNNTNTNSDSDSN------------ 394

  Fly   493 ARRSYQSLQSQSPDLEADGDED 514
                    .:.:|..|.|.|.|
Yeast   395 --------TNSTPPSEDDDDND 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pcyt1NP_001261264.1 PLN02413 202..462 CDD:215229 113/293 (39%)
CCT 204..353 CDD:173925 85/148 (57%)
PCT1NP_011718.1 CCT 102..251 CDD:173925 85/148 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343246
Domainoid 1 1.000 168 1.000 Domainoid score I793
eggNOG 1 0.900 - - E1_COG0615
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S930
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001344
OrthoInspector 1 1.000 - - otm46740
orthoMCL 1 0.900 - - OOG6_101770
Panther 1 1.100 - - O PTHR10739
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R892
SonicParanoid 1 1.000 - - X834
TreeFam 1 0.960 - -
1312.680

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