DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcyt1 and pcyt1ab

DIOPT Version :10

Sequence 1:NP_647621.1 Gene:Pcyt1 / 117353 FlyBaseID:FBgn0041342 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001018571.1 Gene:pcyt1ab / 553770 ZFINID:ZDB-GENE-050522-114 Length:359 Species:Danio rerio


Alignment Length:285 Identity:165/285 - (57%)
Similarity:211/285 - (74%) Gaps:17/285 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 KPAPYSHDEEAMLERDRCDYTQRITYQMARSGQTTRR-VRVYADGIYDLFHQGHARQLMQAKNIF 232
            :|||:: ||   |......|. |::.:.|..|....| ||||||||:|:||.||||.|||||.:|
Zfish    41 EPAPFA-DE---LVTPESAYA-RVSMEDALRGTPEERPVRVYADGIFDMFHSGHARALMQAKCLF 100

  Fly   233 PNVYLIVGVCNDELTHRMKGRTVMNGFERYEGVRHCRYVDEIVQNAPWTLSDEFIADNKIDFVAH 297
            ||.|||||||:|:|||:.||.||||..|||:.|.|||||||:|:|||||||.||:|:::||||||
Zfish   101 PNTYLIVGVCSDDLTHKFKGFTVMNEDERYDAVCHCRYVDEVVRNAPWTLSPEFLAEHRIDFVAH 165

  Fly   298 DDIPYVTDGMDDIYAPLKARGMFVATERTEGVSTSDIVARIVKDYDLYVRRNLARGYSAKELNVS 362
            |||||::.|.||:|..:|..|||..|:||||:|||||:.|||:|||:||||||.|||:|||||||
Zfish   166 DDIPYISAGTDDVYRHIKDAGMFAPTQRTEGISTSDIITRIVRDYDVYVRRNLQRGYTAKELNVS 230

  Fly   363 FLSEKKFRLQNKMDELK-------SRGKRELSKVK---VDIITKWEEKSREFIDTFLLLFGREN- 416
            |::|||:.||..:|::|       .:.|..:.||:   :|:|.||||||||||..||.:||.:. 
Zfish   231 FINEKKYHLQEHVDKVKQKVRNVEEKSKEFVQKVEEKGIDLIQKWEEKSREFIGNFLQMFGPDGA 295

  Fly   417 LNHLWNESKGKLLQALSPPGSPSGS 441
            |.|:..|.||::|||:||..|||.|
Zfish   296 LKHMLKEGKGRMLQAISPRQSPSSS 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pcyt1NP_647621.1 CCT 204..353 CDD:173925 104/149 (70%)
pcyt1abNP_001018571.1 PLN02413 62..290 CDD:215229 141/227 (62%)

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