DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Pcyt1 and Pect

DIOPT Version :9

Sequence 1:	NP_001261264.1	Gene:	Pcyt1 / 117353	FlyBaseID:	FBgn0041342	Length:	526	Species:	Drosophila melanogaster
Sequence 2:	NP_723789.2	Gene:	Pect / 34716	FlyBaseID:	FBgn0032482	Length:	393	Species:	Drosophila melanogaster

Alignment Length:	173	Identity:	64/173 - (36%)
Similarity:	92/173 - (53%)	Gaps:	12/173 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly   199 SGQTTRRVRVYADGIYDLFHQGHARQLMQAKNIFPNVYLIVGVCNDELTHRMKGRTVMNGFERYE 263
            |.:..:.|||:.||.||:.|.|||..|.|||.:...|  |||:..||...:.||..|....||.:
  Fly    14 SDKQRKDVRVWCDGCYDMVHFGHANSLRQAKALGDKV--IVGIHTDEEITKHKGPPVFTEEERVK 76

  Fly   264 GVRHCRYVDEIVQNAPWTLSDEFIADNKIDFVAH-DDIPYVTDGMDDIYAPLKARGMFVATERTE 327
            .|:..::|||:|..||:..:.:.:..|..||..| |||....:|: |.|..:|:...:...:||.
  Fly    77 MVKGIKWVDEVVLGAPYVTTLDVLDQNNCDFCVHGDDITMTAEGV-DTYHLVKSANRYKEVKRTA 140

  Fly   328 GVSTSDIVARIVKDYDLYVRRNLARGYSAK---ELNVSFLSEK 367
            ||||:|:|.|:     |.:.||..|..||:   |..||.|..:
  Fly   141 GVSTTDLVGRM-----LLLTRNHFRQGSAEYDIEKEVSILKRQ 178

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Pcyt1	NP_001261264.1	PLN02413	202..462	CDD:215229	63/170 (37%)
Pcyt1	NP_001261264.1	CCT	204..353	CDD:173925	56/149 (38%)
Pect	NP_723789.2	PTZ00308	16..381	CDD:140329	63/171 (37%)
		CCT	19..165	CDD:173925	58/153 (38%)
		ECT	223..373	CDD:173924
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45447745
Domainoid	1	1.000	54	1.000	Domainoid score	I645
eggNOG	1	0.900	-	-		E1_COG0615
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.740