DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pcyt1 and pcyt-1

DIOPT Version :10

Sequence 1:NP_647621.1 Gene:Pcyt1 / 117353 FlyBaseID:FBgn0041342 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001033539.1 Gene:pcyt-1 / 181021 WormBaseID:WBGene00017241 Length:362 Species:Caenorhabditis elegans


Alignment Length:376 Identity:169/376 - (44%)
Similarity:233/376 - (61%) Gaps:45/376 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 KRKYVPQQQA---SPNH---RVVPASTSQQFF--SGASDFATICKPAPYSHDEEAMLERDRCDYT 189
            |::.:||::.   ||..   .|...:|..::.  |.|||     :|||:|.:..|:..|:..||:
 Worm     5 KQEKMPQRKRTMDSPQEEDVEVKKKATEVEYVVRSLASD-----EPAPFSDEALAITTREAVDYS 64

  Fly   190 QRITYQMARSGQTTRRVRVYADGIYDLFHQGHARQLMQAKNIFPNVYLIVGVCNDELTHRMKGRT 254
            ::||..||.:.:..|.||:||||||||||.|||.||.|.|.:|||||||||||.|..||:.||||
 Worm    65 KKITLAMAEANEAGRPVRIYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGRT 129

  Fly   255 VMNGFERYEGVRHCRYVDEIVQNAPWTLSDEFIADNKIDFVAHDDIPYVTDGMDDIYAPLKARGM 319
            |.:..|||:||||||||||:.:.|||..:.||:.:.|:||:|||.||||..|.:|:|...:..||
 Worm   130 VTSEEERYDGVRHCRYVDEVYREAPWFCTVEFLKNLKVDFIAHDAIPYVAPGEEDLYEKFRREGM 194

  Fly   320 FVATERTEGVSTSDIVARIVKDYDLYVRRNLARGYSAKELNVSFLSEKKFRLQNKMDELKSRGKR 384
            |:.|||||||||||:|.||::|||.||||||.||||.|||||.||:..|:::|||:|.|||:|  
 Worm   195 FLETERTEGVSTSDVVCRIIRDYDKYVRRNLQRGYSPKELNVGFLAASKYQIQNKVDSLKSKG-- 257

  Fly   385 ELSKVKVDIITKWEEKS----REFIDTFLLLFGRENLNHLWNESKGKLLQALSP-----PGSPSG 440
                  :::::.|:.||    |:|||||....|   ||......||.:..:.||     .|||:|
 Worm   258 ------IELLSTWKSKSDDIIRDFIDTFHKDGG---LNAFGGRLKGIMSMSRSPSPSPHEGSPTG 313

  Fly   441 SVNGDDTEGGEDYSETIDEYLEMAEKLSGGSGSGSSGSLNGKQRPKQKRSS 491
            ..:..:|:..|:..|.::|...:.:|:.            .|:...:||||
 Worm   314 IEHHLETQDEEEEEEALEEEKVVEQKIV------------EKKEVVKKRSS 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pcyt1NP_647621.1 CCT 204..353 CDD:173925 96/148 (65%)
pcyt-1NP_001033539.1 CCT 79..228 CDD:173925 96/148 (65%)

Return to query results.
Submit another query.