DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcyt1 and Pcyt1a

DIOPT Version :9

Sequence 1:NP_001261264.1 Gene:Pcyt1 / 117353 FlyBaseID:FBgn0041342 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_511177.2 Gene:Pcyt1a / 140544 RGDID:70515 Length:367 Species:Rattus norvegicus


Alignment Length:324 Identity:173/324 - (53%)
Similarity:227/324 - (70%) Gaps:29/324 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 KRKYVPQQQASPNHRVVPASTSQQFFSGASDFATICKPAPYSHDEEAMLERDRCDYTQ---RITY 194
            :||.||....:.....:| |..|:...|      :.:|||:|.:.|.       |:::   |:|.
  Rat    14 RRKEVPGPNGATEEDGIP-SKVQRCAVG------LRQPAPFSDEIEV-------DFSKPYVRVTM 64

  Fly   195 QMARSGQTTRR-VRVYADGIYDLFHQGHARQLMQAKNIFPNVYLIVGVCNDELTHRMKGRTVMNG 258
            :.|..|....| ||||||||:||||.||||.||||||:|||.|||||||:|||||..||.||||.
  Rat    65 EEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNE 129

  Fly   259 FERYEGVRHCRYVDEIVQNAPWTLSDEFIADNKIDFVAHDDIPYVTDGMDDIYAPLKARGMFVAT 323
            .|||:.|:|||||||:|:||||||:.||:|:::|||||||||||.:.|.||:|..:|..|||..|
  Rat   130 NERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPT 194

  Fly   324 ERTEGVSTSDIVARIVKDYDLYVRRNLARGYSAKELNVSFLSEKKFRLQNKMDELKSRGK----- 383
            :||||:|||||:.|||:|||:|.||||.|||:||||||||::|||:.||.::|::|.:.|     
  Rat   195 QRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEK 259

  Fly   384 -----RELSKVKVDIITKWEEKSREFIDTFLLLFGREN-LNHLWNESKGKLLQALSPPGSPSGS 441
                 :::.:..:|:|.||||||||||.:||.:||.|. |.|:..|.||::|||:||..|||.|
  Rat   260 SKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMFGPEGALKHMLKEGKGRMLQAISPKQSPSSS 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pcyt1NP_001261264.1 PLN02413 202..462 CDD:215229 155/252 (62%)
CCT 204..353 CDD:173925 105/149 (70%)
Pcyt1aNP_511177.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 4/16 (25%)
CCT 75..224 CDD:173925 105/148 (71%)
Amphipathic. /evidence=ECO:0000255 228..287 26/58 (45%)
3 X 11 AA approximate tandem repeats 256..288 12/31 (39%)
Amphipathic. /evidence=ECO:0000255 298..315 8/16 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..367 7/11 (64%)
3 X repeats 319..348 4/5 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340084
Domainoid 1 1.000 204 1.000 Domainoid score I2847
eggNOG 1 0.900 - - E1_COG0615
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3680
Inparanoid 1 1.050 331 1.000 Inparanoid score I2350
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1172502at2759
OrthoFinder 1 1.000 - - FOG0001344
OrthoInspector 1 1.000 - - mtm9063
orthoMCL 1 0.900 - - OOG6_101770
Panther 1 1.100 - - O PTHR10739
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X834
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.760

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