DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcyt1 and pcyt1a

DIOPT Version :9

Sequence 1:NP_001261264.1 Gene:Pcyt1 / 117353 FlyBaseID:FBgn0041342 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_002934091.3 Gene:pcyt1a / 100496938 XenbaseID:XB-GENE-1001244 Length:400 Species:Xenopus tropicalis


Alignment Length:325 Identity:173/325 - (53%)
Similarity:228/325 - (70%) Gaps:23/325 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 KRKYVPQQQASPNHRVVPASTSQQFFSGASDFATICKPAPYSHDEEAMLERDRCDYTQRITYQMA 197
            :||.|.....:.:...||...::....       :.:|||:| ||   |:.||.:..:|::.:.|
 Frog    47 RRKDVAGPNGTTDEDHVPIKVARHTMG-------VREPAPFS-DE---LKVDRSNTYRRVSMEEA 100

  Fly   198 RSGQTTRR-VRVYADGIYDLFHQGHARQLMQAKNIFPNVYLIVGVCNDELTHRMKGRTVMNGFER 261
            :.|....| ||||||||:||||.||||.||||||:|||.:||||||:|||||.:||.||||..||
 Frog   101 KLGTPIERPVRVYADGIFDLFHSGHARALMQAKNLFPNTHLIVGVCSDELTHNLKGFTVMNEAER 165

  Fly   262 YEGVRHCRYVDEIVQNAPWTLSDEFIADNKIDFVAHDDIPYVTDGMDDIYAPLKARGMFVATERT 326
            |:.|:|||||||:|:|||||||.||:..::|||||||||||.:.|.||:|..:|..|||..|:||
 Frog   166 YDAVQHCRYVDEVVRNAPWTLSPEFLEKHRIDFVAHDDIPYSSAGSDDVYKHIKDAGMFAPTQRT 230

  Fly   327 EGVSTSDIVARIVKDYDLYVRRNLARGYSAKELNVSFLSEKKFRLQNKMDELKSRGK-------- 383
            ||:|||||:.|||:|||:||||||.|||:||||||||::||:|.||.::|::|.:.|        
 Frog   231 EGISTSDIITRIVRDYDVYVRRNLQRGYTAKELNVSFINEKRFNLQERVDKVKKKVKDVEEKSKE 295

  Fly   384 --RELSKVKVDIITKWEEKSREFIDTFLLLFGREN-LNHLWNESKGKLLQALSPPGSPSGSVNGD 445
              :::.:..:|:|.||||||||||..||.:||.|. |.|:..|.||::|||:||..|||.|...|
 Frog   296 FVQKVEEKSIDMIQKWEEKSREFIGNFLEMFGPEGALKHMLKEGKGRMLQAISPKQSPSSSPTRD 360

  Fly   446  445
             Frog   361  360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pcyt1NP_001261264.1 PLN02413 202..462 CDD:215229 156/256 (61%)
CCT 204..353 CDD:173925 105/149 (70%)
pcyt1aXP_002934091.3 CCT 108..257 CDD:173925 105/148 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 203 1.000 Domainoid score I2893
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3680
Inparanoid 1 1.050 334 1.000 Inparanoid score I2365
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1172502at2759
OrthoFinder 1 1.000 - - FOG0001344
OrthoInspector 1 1.000 - - mtm9481
Panther 1 1.100 - - O PTHR10739
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R892
SonicParanoid 1 1.000 - - X834
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.100

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