DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcyt1 and pcyt1ba

DIOPT Version :9

Sequence 1:NP_001261264.1 Gene:Pcyt1 / 117353 FlyBaseID:FBgn0041342 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001076415.1 Gene:pcyt1ba / 100001552 ZFINID:ZDB-GENE-061220-4 Length:343 Species:Danio rerio


Alignment Length:364 Identity:173/364 - (47%)
Similarity:226/364 - (62%) Gaps:51/364 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 TICKPAPYSHDEEAMLERDRCDYT---QRITYQMARSG-QTTRRVRVYADGIYDLFHQGHARQLM 226
            |:.:||.::.:..       |:..   :::|...|..| ...|.||||||||:||||.||||.||
Zfish    14 TLIEPAIFTPETS-------CECRAPHEKLTVDQASHGTPVDRPVRVYADGIFDLFHSGHARALM 71

  Fly   227 QAKNIFPNVYLIVGVCNDELTHRMKGRTVMNGFERYEGVRHCRYVDEIVQNAPWTLSDEFIADNK 291
            ||||:|||.|||||||:|||||:.||.|||...||||.:||||||||::::|||||:.:|:..:|
Zfish    72 QAKNLFPNTYLIVGVCSDELTHKYKGFTVMTEDERYEALRHCRYVDEVLRDAPWTLTQDFLEKHK 136

  Fly   292 IDFVAHDDIPYVTDGMDDIYAPLKARGMFVATERTEGVSTSDIVARIVKDYDLYVRRNLARGYSA 356
            |||||||||||.:.|.:|:|..:|..||||.|:||||:||||::.|||:|||:|.||||.|||:|
Zfish   137 IDFVAHDDIPYSSAGSEDVYKHIKEAGMFVPTKRTEGISTSDLITRIVRDYDVYARRNLQRGYTA 201

  Fly   357 KELNVSFLSEKKFRLQNKMDELKS--RGKRELSKVKV--------DIITKWEEKSREFIDTFLLL 411
            ||||||:::|||:||||::|.:|.  |...|.||..|        |:|.||||||||||..||.|
Zfish   202 KELNVSYINEKKYRLQNQVDRMKEKVRTVEEKSKHFVYRVEEKSHDLIQKWEEKSREFIGNFLEL 266

  Fly   412 FGRENL-NHLWNESKGKLLQALSPPGSPSGSVNGDDTEGGEDYSETIDEYLEMAEKLSGGSGSGS 475
            ||.:.. ..::.|..|:::||.||.||||.|...|                        .|.|.|
Zfish   267 FGPDGTWKQMFQERSGRMIQAFSPRGSPSSSPPRD------------------------FSPSRS 307

  Fly   476 SGSLNGKQRPKQKRSSLARRSYQSLQSQSPDLEADGDED 514
            ....:....|:....|..:.:..|:.|.|     :||||
Zfish   308 PSPPSRWAMPRTSPPSSPKGASASISSMS-----EGDED 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pcyt1NP_001261264.1 PLN02413 202..462 CDD:215229 154/270 (57%)
CCT 204..353 CDD:173925 101/148 (68%)
pcyt1baNP_001076415.1 CCT 49..198 CDD:173925 101/148 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579928
Domainoid 1 1.000 199 1.000 Domainoid score I3006
eggNOG 1 0.900 - - E1_COG0615
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 327 1.000 Inparanoid score I2448
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1172502at2759
OrthoFinder 1 1.000 - - FOG0001344
OrthoInspector 1 1.000 - - mtm6570
orthoMCL 1 0.900 - - OOG6_101770
Panther 1 1.100 - - O PTHR10739
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R892
SonicParanoid 1 1.000 - - X834
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

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