DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr22f and egl-47

DIOPT Version :9

Sequence 1:NP_722729.2 Gene:Gr22f / 117349 FlyBaseID:FBgn0041249 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001023728.1 Gene:egl-47 / 183687 WormBaseID:WBGene00001211 Length:522 Species:Caenorhabditis elegans


Alignment Length:464 Identity:87/464 - (18%)
Similarity:164/464 - (35%) Gaps:165/464 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FSC-----HLAWFMLQTTLYASWLLGLFPFTFD--SRRKQLKRS-RWLLLYGFVLHSLAMCLAMS 66
            |.|     |.....|::.|:...||.:||.|.|  ||||:..|| ..|:||   ::.:.:.:.::
 Worm    96 FECSWRGVHCVSNSLRSILFLFRLLAIFPATTDRKSRRKRNHRSIIKLILY---VNYIVLAVLLN 157

  Fly    67 SHLASKQRRKYNAFERNPLLEKIYMQFQVTTFFTISVLLLMNVWKSNTVRKIANELLTLEGQVKD 131
            |.|                   |.|.|:|...:.....|:..                  |.|..
 Worm   158 SFL-------------------IKMNFKVLMLYKHKFGLMHT------------------GTVAS 185

  Fly   132 LLTLKNCPNFNCFVI-------KKHV--------------AAIG--------QFV-----ISIYF 162
            ::|... |..|.|||       |.|.              :|.|        :||     :.|:|
 Worm   186 MITATK-PVINVFVIVLSAIKFKSHQRLLKTIDMVDVCFRSAFGVSPPLRIYKFVFFFTLLIIFF 249

  Fly   163 CLCQENSYPKILKIL----------------C---CLPSVGLQLII--MHFHTEIILVYRYVWLV 206
            ...       |||::                |   .:|.:.|..||  :::|...|||..|...:
 Worm   250 SAL-------ILKVVEFVGTGEIFGEHILTDCSFILVPVLSLWNIIPLLYYHLYNILVRFYCRTL 307

  Fly   207 NETLEDSHHLSSSRIHALASLYDRLLKLSELVVACNDL------------QLILMLIIYLIGNTV 259
            .:::...|   ..|..:|...|::..:::.:..|..|:            .|:|.|.:|.:....
 Worm   308 IKSMNREH---KKRHFSLKFYYEQFTRITNVQEAVGDVFNPLLLFSLAWSLLVLCLTLYFLSEPT 369

  Fly   260 QIFFLIV-------------LGVSMNKRYIYLVASPQLIINFWDFWLNIVVCDLAGKCGDQTSK- 310
            ....:.:             |.::::.:..:  |:.|:::..    |:|::....|...::|:: 
 Worm   370 STLLVPITPEQVTNPKIREKLNITVHVKICW--AAYQVVMAI----LHIIIICSTGMMTNETTRQ 428

  Fly   311 ----VLKLFTDLEHDDEELE------RSLNEFAW-LCTHRKFRFQLCGLFSINHNMGFQMIITSF 364
                ||::..|...|.:..:      :...:|.| :...|.|..:....|::     ..:|:|  
 Worm   429 IVNAVLRIVPDANADLDRFQISCFVHKMTTQFMWGMTVWRAFPLERTTFFTL-----ISVIVT-- 486

  Fly   365 LYLVYLLQF 373
             |.:.|.:|
 Worm   487 -YSLLLFRF 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr22fNP_722729.2 7tm_7 19..377 CDD:285581 84/450 (19%)
egl-47NP_001023728.1 7tm_7 110..495 CDD:303125 84/450 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.