DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr22f and lite-1

DIOPT Version :9

Sequence 1:NP_722729.2 Gene:Gr22f / 117349 FlyBaseID:FBgn0041249 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:445 Identity:91/445 - (20%)
Similarity:156/445 - (35%) Gaps:143/445 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 WFMLQTTLYASW----LLGLFPFTFDSRRKQLKRSRWLLLYGFVLHS-LAMCLAMSSHLASKQRR 75
            |.:...|||..:    :|||        .:.::.:..||   |.::| |..||.:.:.|     |
 Worm    41 WAICDRTLYPIYYLLLILGL--------NQSIRPNNSLL---FRIYSWLVFCLLLFTTL-----R 89

  Fly    76 KYNAFERNPLLEKIYMQFQVTTFFTISVLLLMNVWKSNTVRKIANELLTLEGQV----------K 130
            |:|.....|...:..:|    .||.          ...::..:.|.|:.|.|.:          |
 Worm    90 KFNQVGVRPNGTRENLQ----EFFA----------NPRSMITLCNALIMLSGLLASLQLYTLGAK 140

  Fly   131 DLLTLKNCPNFNCFVIKKHVAAIGQFVISIYFCLCQENSYPKILKILC----CLPSVGLQLIIM- 190
            .|..||....|:..|..|. |...||:|:.:..:     :..:|.:..    .:...|..|.|: 
 Worm   141 RLKPLKILCQFSLNVRTKQ-AERRQFMINTFLAV-----FSGLLALTMAATYAMSKWGYILYIVG 199

  Fly   191 --HFHTEIILVYRYVWLVNETLEDSHHLSSSR--IHALASLY-------DRLLK--LSELVVACN 242
              :..||.|..         .|.||:.|..||  |.|||.|:       .|.:|  ::|:|.|..
 Worm   200 TPNLDTETIFC---------VLLDSYALFVSRAAISALAILFYQHCSVIRRSIKHLINEMVPAEQ 255

  Fly   243 D--------LQLI---------------------LMLIIYLIGNTVQIF-FLIVLGVS------- 270
            |        ||.|                     ..::.|..|..:.|| ||:.:|:|       
 Worm   256 DECPLPESSLQKIHDCQISYQRIFNGKAVIEEYYSFVLFYSYGVCIPIFCFLMFVGMSAQSICWS 320

  Fly   271 ---------MNKRYIYLVAS-PQLIINFWDFWLNIVVCDLAGKCGDQ-TSKVLKLFTDLEHDDEE 324
                     :|...:.|:.| |..:||               :.||: .:...:::.:..|::.:
 Worm   321 EVVSIVIWIVNAILVLLLFSLPAFMIN---------------EDGDRLVASSFRMYHETFHEERD 370

  Fly   325 LE--RSLNEFAWLCTHRKFRFQLCGLFSINHNMGFQMIITSFLYLVYLLQFDFMN 377
            |.  ..:..|.:.....|.....|..|.::.::...:......|.:.|.:||..|
 Worm   371 LTVLSQMTFFTFQIHSTKLTLSACNYFYMDRSILLSLFSAILTYFLILWEFDIKN 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr22fNP_722729.2 7tm_7 19..377 CDD:285581 89/440 (20%)
lite-1NP_509043.3 7tm_7 75..425 CDD:285581 80/398 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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