DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28a and Gr43a

DIOPT Version :9

Sequence 1:NP_523504.2 Gene:Gr28a / 117348 FlyBaseID:FBgn0041247 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001286158.1 Gene:Gr43a / 35655 FlyBaseID:FBgn0041243 Length:453 Species:Drosophila melanogaster


Alignment Length:476 Identity:94/476 - (19%)
Similarity:177/476 - (37%) Gaps:104/476 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FIS-LLGLAPFRLNLNPRKEVQTSKFSFFAGIVHFLFFVLCFGISVKEGDSIIGYFFQTNIT--- 84
            :|| :|.|||:....|.:..|:..:...|......|..|:.| ::.:      |..|..|..   
  Fly    12 YISKVLALAPYATVRNSKGRVEIGRSWLFTVYSATLTVVMVF-LTYR------GLLFDANSEIPV 69

  Fly    85 ----RFSDGTLRL-----TGILAMSTIFGF--AMFKRQRLVSIIQNNIVVDEIFVRLGMKLDYRR 138
                |....|.::     ..::.|:.:.|.  .:|.   |...::.|..:::|...|....::||
  Fly    70 RASFRMKSATSKVVTALDVSVVVMAIVSGVYCGLFS---LNDTLELNDRLNKIDNTLNAYNNFRR 131

  Fly   139 ILLSSFLISLGMLLFNVIYLCVSYSLLVSA--------TISPS--------FVTFTTFALPHINI 187
                ....:|||...:::.:.:...|.|..        .|:.|        ::.|  ::|..|..
  Fly   132 ----DRWRALGMAAVSLLAISILVGLDVGTWMRIAQDMNIAQSDTELNVHWYIPF--YSLYFILT 190

  Fly   188 SLMVFKFLCTTDLARSRFSMLNEILQDILDAHIEQLSALELSPMHSVVNHRRYSHRLRNLISTP- 251
            .|.|........|.| ||..||.:|.....|.....||::...:.:|.|..         ::.| 
  Fly   191 GLQVNIANTAYGLGR-RFGRLNRMLSSSFLAENNATSAIKPQKVSTVKNVS---------VNRPA 245

  Fly   252 MKRYSVTSVIRLNPE----------------------------------YAIKQVSNIHNLLCDI 282
            |......|:.:||.|                                  ..:|.:::.|..|...
  Fly   246 MPSALHASLTKLNGETLPSEAAGDKAAARSLILNVELLKLGYFPAKNKGLLLKSLADSHESLGKC 310

  Fly   283 CQTIEEYFTYPLLGIIAISFLFILFDDFYILEAILNPKRLDVFEADEFFAFFLMQLIW---YIVI 344
            ...:...|...:|.|:....|.::...:::...:|:.:       |.  .:..:|::|   :.:.
  Fly   311 VHLLSNSFGIAVLFILVSCLLHLVATAYFLFLELLSKR-------DN--GYLWVQMLWICFHFLR 366

  Fly   345 IVLIVEGSSRTILHSSYTAAIVHKILNITDDPELRDRLFRLSLQLSHRKVLFTAAGLFRLDRTLI 409
            ::::||........|..|..||.:|.....:|.|.:.:.:...||......|:|.||.|::||::
  Fly   367 LLMVVEPCHLAARESRKTIQIVCEIERKVHEPILAEAVKKFWQQLLVVDADFSACGLCRVNRTIL 431

  Fly   410 FTITGAATCYLIILIQFRFTH 430
            .:...|...||:|||||:.|:
  Fly   432 TSFASAIATYLVILIQFQRTN 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28aNP_523504.2 7tm_7 22..430 CDD:285581 93/474 (20%)
Gr43aNP_001286158.1 7tm_7 10..449 CDD:285581 92/471 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C1WA
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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