DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28a and Gr59c

DIOPT Version :9

Sequence 1:NP_523504.2 Gene:Gr28a / 117348 FlyBaseID:FBgn0041247 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_726292.1 Gene:Gr59c / 192481 FlyBaseID:FBgn0041235 Length:397 Species:Drosophila melanogaster


Alignment Length:430 Identity:87/430 - (20%)
Similarity:151/430 - (35%) Gaps:146/430 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 ILAMSTIFGFAMFKRQRLVSIIQNNIVVDEIFVRLGMKLDYRRILL-----SSFLISLGMLLFNV 155
            ||.::..:|.|       |.:  :|..||.:   .|..:..||..:     ::.||:| ::||| 
  Fly     8 ILLIAYWYGLA-------VGV--SNFEVDWL---TGEAIATRRTTIYAAVHNASLITL-LILFN- 58

  Fly   156 IYLCVSYSLLVSATISPSFVTFTTFAL-PHINISLMVFKFLCTTDLARSRFSML-NEILQDILDA 218
                :..:.|.|..||..::....|.| ..:.||.::.. |.|....||||..: |:||..:.| 
  Fly    59 ----LGNNSLKSEFISARYLHEYFFMLMTAVRISAVLLS-LITRWYQRSRFIRIWNQILALVRD- 117

  Fly   219 HIEQLSALELSPMHSVVNHRRY-------------SHRLRNL--ISTPMKRYSVTSVIRLNPEYA 268
                        ...||..|.|             |..|..:  :|...||.:...:::|:   .
  Fly   118 ------------RPQVVRGRWYRRSIILKFVFCVLSDSLHTISDVSAQRKRITADLIVKLS---L 167

  Fly   269 IKQVSNIHNLLCDICQTIEEYFTYPLLGIIAISFLFILFDDF--------------------YIL 313
            :..::.|.|::  :||       |.|..:..|....||..|.                    |.:
  Fly   168 LATLTTIFNMI--VCQ-------YYLAMVQVIGLYKILLQDLRCLVRQAECICSIRNRRGGVYSI 223

  Fly   314 EAILNPKRLDVF---------EADEFFAFFLMQLIWYIVIIVLIVEGS----------SRTILHS 359
            :......:||:.         ..||....|.:|.:...::......||          |.|...|
  Fly   224 QCCSLADQLDLIAERHYFLKDRLDEMSDLFQIQSLSMSLVYFFSTMGSIYFSVCSILYSSTGFGS 288

  Fly   360 SY---------TAAI-------VHKILNITDDPELRDRLFRL----------------------S 386
            :|         ||:.       |:...:|.|.   :|.|||:                      .
  Fly   289 TYWGLLLIVLSTASFYMDNWLSVNIGFHIRDQ---QDELFRVLADRTLFYRELDNRLEAAFENFQ 350

  Fly   387 LQLSHRKVLFTAAGLFRLDRTLIFTITGAATCYLIILIQF 426
            |||:..:..|...|||:::|..:..:..:...:.::|:|:
  Fly   351 LQLASNRHEFYVMGLFKMERGRLIAMLSSVITHTMVLVQW 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28aNP_523504.2 7tm_7 22..430 CDD:285581 87/430 (20%)
Gr59cNP_726292.1 7tm_7 9..394 CDD:285581 86/429 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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