DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28a and Gr22d

DIOPT Version :9

Sequence 1:NP_523504.2 Gene:Gr28a / 117348 FlyBaseID:FBgn0041247 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001259882.1 Gene:Gr22d / 14462661 FlyBaseID:FBgn0045498 Length:387 Species:Drosophila melanogaster


Alignment Length:460 Identity:90/460 - (19%)
Similarity:178/460 - (38%) Gaps:134/460 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VFQALRPLTFIS-LLGLAPFRLNLNPRKEVQTSKFSFFAGIVHFLFFVLCFGISVKEGD-SIIGY 77
            |:..|:.:.:.| |||:.||:.....|:..::.....|..::.....:|....|.::.: .|:..
  Fly    13 VYVILKSILYSSWLLGIFPFKYEPKKRRLRRSMWLILFGVVISSSLLILMVKQSAEDREHGIMLD 77

  Fly    78 FFQTNITRFSDGTLR-LTGILAMSTIFGFAMFKRQRLVSI------------------------- 116
            .||.|...:...:|. :.|::::.|:....:::.:.|..|                         
  Fly    78 VFQRNALLYQISSLMGVVGVVSICTVHLRTLWRSKHLEEIYNGLMLLEAKYFCSNAVECPAFDGY 142

  Fly   117 -IQNNIVV-----DEIFVRLGM---KLDYRRILLSSFLISLGMLLFNVIYLCVSYSLLVSATISP 172
             ||..:|:     ....|..||   ||....:|:.| ::.||.||..:.|               
  Fly   143 VIQKGVVIVVGLLAPWMVHFGMPDSKLPVLNVLVVS-MVKLGTLLLALHY--------------- 191

  Fly   173 SFVTFTTFALPHINISLMVFKFLCTTDLARSRFSMLNEILQDILDAHIEQLSALELSPMHSV-VN 236
                       |:.: :::::|:.          ::|..|               ||.:.|: .|
  Fly   192 -----------HLGV-VIIYRFVW----------LINREL---------------LSLVCSLRGN 219

  Fly   237 HRRYSHRLRNLISTPMKRYSVTSVIRLNPEYAIKQVSNIHNLLCDI--CQTIEEYFTYPLLGIIA 299
            |:..|.|:|.|    :|.|:              ::.|:::.|.|.  |||:.....: |...|.
  Fly   220 HKGSSSRVRFL----LKLYN--------------KLVNLYSKLADCYDCQTVLMMAIF-LAANII 265

  Fly   300 ISFLFILFD------DFYILEAILNPKRLDVFEADEFFAFFLMQLIWYIVIIVLIVEGSSRTILH 358
            :.|..|::.      .|::: .|:.|..:    |:.|..|:|...:..::         .:|...
  Fly   266 VCFYMIVYRISLSKMSFFVM-LIMFPLAI----ANNFMDFWLSMKVCDLL---------QKTGRQ 316

  Fly   359 SSYTAAIVHKILNITDDPELRDRLFRLSLQLSHRKVLFTAAGLFRLDRTLIFTITGAATCYLIIL 423
            :|....:.:.|.|:  |.:|...:...:|..|||:..|...|||.::|.:.|.:..|:..||:.|
  Fly   317 TSMILKLFNDIENM--DKDLEISISDFALYCSHRRFKFLHCGLFHVNREMGFKMFVASVLYLLYL 379

  Fly   424 IQFRF 428
            :||.:
  Fly   380 VQFDY 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28aNP_523504.2 7tm_7 22..430 CDD:285581 88/453 (19%)
Gr22dNP_001259882.1 7tm_7 17..386 CDD:285581 89/456 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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