DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr28a and LOC1278209

DIOPT Version :10

Sequence 1:NP_523504.2 Gene:Gr28a / 117348 FlyBaseID:FBgn0041247 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_317761.2 Gene:LOC1278209 / 1278209 VectorBaseID:AGAMI1_012692 Length:436 Species:Anopheles gambiae


Alignment Length:494 Identity:104/494 - (21%)
Similarity:194/494 - (39%) Gaps:147/494 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FSQADNVFQALRPLTFISLLGLAPFRLNLNPRKEVQTSKFSFFAGIVHFL-FFVLCFGIS-VKEG 71
            |:.:.::..|:.||..||.:|.      ||        .|::.. :.||| .:..|.... ||.|
Mosquito     7 FAWSISLQNAIIPLYIISKVGC------LN--------AFTYLP-LFHFLDTYAGCKSDKCVKIG 56

  Fly    72 DSIIGYFFQTNITRF--SDG---TLRLTGIL-AMSTIFGFAMFKRQRLVSIIQNNIVVDEIFVRL 130
            .:.|      .:.||  .||   .....|:| |:.....:|.:  ..|.|:.|:..:.|...||:
Mosquito    57 TADI------PVKRFKGKDGKPLAFSFIGVLHALGCSLAYASY--HILSSLSQSGKLTDSNLVRV 113

  Fly   131 GMKLDYRRILLSSFLISLGMLLFNVIYLCVSYSLLVSATIS-----PSFV-TFTTFALPHINISL 189
            .:.|..:.|   ..::.||:::.:::.. .::|.|:...:|     |..| |....|:..:.::.
Mosquito   114 AIDLKNQYI---GCILVLGIVMVSLVRQ-PAFSRLIQVLLSVDRAIPEMVRTAGLSAITKVKVNN 174

  Fly   190 MVFKFLCTTDLARSRFSMLNEILQDILDAHIEQLSALEL-----------SPMHS---------- 233
            :|:              :.|.:|..||...::  :.||:           ||..|          
Mosquito   175 IVW--------------LRNVLLMLILGVGVK--AVLEVTNCLMYIRDSGSPFSSNCLLLCIIPQ 223

  Fly   234 ---VVNHRRY-------SHRLRNLISTPMKRYSVTSVIRLNPEY---------AIKQVSNIHNLL 279
               |::..::       |.||:.|     .|:    :::|.|..         :::.:..||..|
Mosquito   224 TLCVISELQFVAFALLISERLKLL-----NRW----LLQLLPHLGRGSEAAYESVRHLVRIHGQL 279

  Fly   280 CDICQTIEEYFTYPLLGIIAISF-----LFILFDDFYILEAILNPKRLDVFEAD---------EF 330
                        ...:|::...|     :.:|:....::|...|...:.|..|:         |.
Mosquito   280 ------------LKAIGLLNCCFGVQNTILLLYQFVTLVELGYNTCMMSVRYAEAKVQQGDSTED 332

  Fly   331 FAFFLMQLIWYIVIIVLIVEGSSRTILHSSYTAAIVHKILNITDDPELRDRLFRLSLQ-LSHRKV 394
            |...:..::|::|.|.::...|..|:..:..|   || :|.:   |.:.....|::.: :|..::
Mosquito   333 FLETVYWVVWFVVEIFVLCYFSHDTVEEARRT---VH-LLRM---PNVYGPCQRINFRTISQEQL 390

  Fly   395 LF-------TAAGLFRLDRTLIFTITGAATCYLIILIQF 426
            :|       :..|||.:|.||...|.||.|.||||||||
Mosquito   391 VFRNVKTSISCCGLFTIDLTLFHAIIGATTTYLIILIQF 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28aNP_523504.2 7tm_7 22..430 CDD:462463 101/481 (21%)
LOC1278209XP_317761.2 7tm_7 69..433 CDD:462463 84/411 (20%)

Return to query results.
Submit another query.