DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr28a and Gr22a

DIOPT Version :9

Sequence 1:NP_523504.2 Gene:Gr28a / 117348 FlyBaseID:FBgn0041247 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_722733.1 Gene:Gr22a / 117500 FlyBaseID:FBgn0045501 Length:394 Species:Drosophila melanogaster


Alignment Length:426 Identity:82/426 - (19%)
Similarity:169/426 - (39%) Gaps:91/426 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LLGLAPFRLNLNPRKEVQTSKFSFFAGIV-HFLFFVLCFGISVKEGDSIIGYFFQTN--ITRFSD 88
            :|||.||..:...|: :..||:....|:| :....||....|..:.:|:....||.|  :.:..:
  Fly    28 VLGLFPFTFDSRKRR-LNRSKWLLAYGLVLNLTLLVLSMLPSTDDHNSVKVEVFQRNPLVKQVEE 91

  Fly    89 GTLRLTGILAMST--IFGFAMFKR-QRLVSIIQNNIVVDEIFVRLGMKLDYRRILLSS------F 144
                |..::::.|  :.....|.| ..||.|:...:|:|        |..:.:::||.      :
  Fly    92 ----LVEVISLITTLVTHLRTFSRSSELVEILNELLVLD--------KNHFSKLMLSECHTFNRY 144

  Fly   145 LISLGMLLFNVIYLCVSYSLLVSATISPSFVTFTTFALPHINISLMVFKFLCTTDLARSRFSMLN 209
            :|..|:    ||.|.:..||::            .|.:|  |..::|::.:|.       :.:..
  Fly   145 VIEKGL----VIILEIGSSLVL------------YFGIP--NSKIVVYEAVCI-------YIVQL 184

  Fly   210 EILQDILDAHIEQLSALELSPMHSVVNHRRY----SHRLRNLISTPMKRYSVTSVIRLNPEYAIK 270
            |:|..::..|:            :|:...||    :.:|.::.|...:..||      :|: .|:
  Fly   185 EVLMVVMHFHL------------AVIYIYRYLWIINGQLLDMASRLRRGDSV------DPD-RIQ 230

  Fly   271 QVSNIHNLLCDICQTIEEYFTYPLLGIIAISFLFILFDDFYILEAILNPKRLDVFEADEFFAFFL 335
            .:..:::.|.|:...:...:...:...:|..|...:.....::...:|..|   |.....|..|.
  Fly   231 LLLWLYSRLLDLNHRLTAIYDIQVTLFMATLFSVNIIVGHVLVICWINITR---FSLLVIFLLFP 292

  Fly   336 MQLI------WYIVIIVLIVEGSSRTILHSSYTAAIVHKILNITD--DPELRDRLFRLSLQLSHR 392
            ..||      |..:....:.|.:.:       ..:::.|:.|..:  |.|...|:...:|..|||
  Fly   293 QALIINFWDLWQGIAFCDLAESTGK-------KTSMILKLFNDMENMDQETERRVTEFTLFCSHR 350

  Fly   393 KVLFTAAGLFRLDRTLIFTITGAATCYLIILIQFRF 428
            ::.....||..::..:.|.:......|::.|:||.:
  Fly   351 RLKVCHLGLLDINYEMGFRMIITNILYVVFLVQFDY 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28aNP_523504.2 7tm_7 22..430 CDD:285581 82/426 (19%)
Gr22aNP_722733.1 7tm_7 19..388 CDD:285581 82/426 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.