DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28a and Gr22c

DIOPT Version :9

Sequence 1:NP_523504.2 Gene:Gr28a / 117348 FlyBaseID:FBgn0041247 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_722732.2 Gene:Gr22c / 117499 FlyBaseID:FBgn0265138 Length:383 Species:Drosophila melanogaster


Alignment Length:435 Identity:88/435 - (20%)
Similarity:171/435 - (39%) Gaps:115/435 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LGLAPFRLNLNPRKEVQTSKFSFFAGIVHFLFFVL---CFG---ISVKEGDSIIGYFFQTNITRF 86
            ||:.|:|.: :...:::.|:|..|.|::...|.:|   |.|   :.:.|.      |.:.::.  
  Fly    27 LGVFPYRFD-SRNGQLKRSRFLLFYGLILNFFLLLKMVCSGGQKLGIPEA------FARNSVL-- 82

  Fly    87 SDGTLRLTGILAM--STIFGFAMFKRQRLVSIIQNNIVVDEIFVRLGMKLDYRRIL--------- 140
             :.|...||:||:  ..:..|..|.....|..:.|.::|          |:|::..         
  Fly    83 -ENTHYTTGMLAVFSCVVIHFLNFWGSTRVQDLANELLV----------LEYQQFASLNETKCPK 136

  Fly   141 LSSFLIS-----LGMLLFNVIYLCVSYSL----------LVSATISPSFVTFTTFALPHINIS-L 189
            .:||:|.     :|:||   .||.::|.|          |:::.:..||    ...:.|..|. |
  Fly   137 FNSFVIQKWLSVIGLLL---SYLSIAYGLPGNNFSVEMVLINSLVQFSF----NCNIMHYYIGVL 194

  Fly   190 MVFKFLCTTDLARSRFSMLNEILQDILDAHIEQLSALELSPMHSVVNHRRYSHRLRNLISTPMKR 254
            :::::|.          ::|..|       :|.::.|:|.........|:|....|.|:.  :|.
  Fly   195 LIYRYLW----------LINGQL-------LEMVTNLKLDCSVDSSRIRKYLSLYRRLLE--LKG 240

  Fly   255 YSVTSVIRLNPEYAIKQVSNIHNLLCDICQTIEEYFTYPLLGI-IAISFLFILFDDFYILEAILN 318
            |.|.:.     ||.:..|     |...:.......:::.:|.| :.|:|:::|....::|..:.|
  Fly   241 YMVATY-----EYHMTLV-----LTTGLASNFLAIYSWIVLDISMNINFIYLLIFPLFLLVNVWN 295

  Fly   319 PKRLDVFEADEFFAFFLMQLIWYIVIIVLIVEGSSRTILHSSYTAAIVHKILNITDDPELRDRLF 383
                                :|..:....:.|.:.:    |:.|...:...|.: .|.||...:.
  Fly   296 --------------------LWLSIAASDLAENAGK----STQTVLKLFADLEV-KDIELERSVN 335

  Fly   384 RLSLQLSHRKVLFTAAGLFRLDRTLIFTITGAATCYLIILIQFRF 428
            ..:|...|.:..|...|||.::..:.|.:...:..|||.:|||.|
  Fly   336 EFALLCGHCQFNFHVCGLFTINYKMGFQMIITSFLYLIYMIQFDF 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28aNP_523504.2 7tm_7 22..430 CDD:285581 88/435 (20%)
Gr22cNP_722732.2 7tm_7 17..382 CDD:285581 88/435 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450278
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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