DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28a and Gr28b

DIOPT Version :9

Sequence 1:NP_523504.2 Gene:Gr28a / 117348 FlyBaseID:FBgn0041247 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster


Alignment Length:443 Identity:153/443 - (34%)
Similarity:255/443 - (57%) Gaps:30/443 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WERFSQADNVFQALRPLTFISLL-GLAPFRLNLNP---RKEVQTSKFSFFAGIVHFLFFVLCFGI 66
            :.||..|..:::.|||:..::.: ||..|.::.:.   :|.::.:.|.:..||:|...||..:.:
  Fly    32 FRRFVTAKQLYECLRPVFHVTYIHGLTSFYISCDTKTGKKAIKKTIFGYINGIMHIAMFVFAYSL 96

  Fly    67 SVKEG-DSIIGYFFQTNITRFSDGTLRLTGILAMSTIFGFAMFKRQRLVSIIQNNIVVDEIFVRL 130
            ::... :|:..|||::.||.|.|....::|.:.::.|:..|.....||...:|....:|.....:
  Fly    97 TIYNNCESVASYFFRSRITYFGDLMQIVSGFIGVTVIYLTAFVPNHRLERCLQKFHTMDVQLQTV 161

  Fly   131 GMKLDYRRILLSSFLISLGMLLFNVIYLCVSYSLLVSATISPSFVTFTTFALPHINISLMVFKFL 195
            |:|:.|.::|..|:::.:.|.|.||::...::|:|.|:.::|:.....||.:.|..|::.:..|.
  Fly   162 GVKIMYSKVLRFSYMVLISMFLVNVLFTGGTFSVLYSSEVAPTMALHFTFLIQHTVIAIAIALFS 226

  Fly   196 CTTDLARSRFSMLNEILQDILDAHIEQLSALELSPMHSVVNHRRYSHRLRNLISTPMKRYSVTSV 260
            |.|.|...|..|:|::|:::  ||.....:|:      .||.::.|  |:.|.|     :|:.::
  Fly   227 CFTYLVEMRLVMVNKVLKNL--AHQWDTRSLK------AVNQKQRS--LQCLDS-----FSMYTI 276

  Fly   261 IRLNPEYAIKQVSNIHNLLCDICQTIEEYFTYPLLGIIAISFLFILFDDFYILEAIL-NPKRLDV 324
            :..:|...|::...||:|:|:...|..:||||.||.||:|:||.|:||.:|:||.:| ..||...
  Fly   277 VTKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRESK 341

  Fly   325 FEADEFFAFFLMQLIWYIVIIVLIVEGSSRTILHSSYTAAIVHKILNITDDPELRDRLFRLSLQL 389
            |:..||..||..|:|.|::.|:.|||||:|.|..|..|..|||.:||.|...|::::|.:.|:||
  Fly   342 FKTVEFVTFFSCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAEVKEKLQQFSMQL 406

  Fly   390 SHRKVLFTAAGLFRLDRTLIFTITGAATCYLIILIQFRFTHHMDDTSSNSTNN 442
            .|.|:.|||||||.:||||.|||:||.|.|||||:||         :|||.||
  Fly   407 MHLKINFTAAGLFNIDRTLYFTISGALTTYLIILLQF---------TSNSPNN 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28aNP_523504.2 7tm_7 22..430 CDD:285581 142/413 (34%)
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 143/412 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450267
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C1WA
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0014262
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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