DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28a and Gr39b

DIOPT Version :9

Sequence 1:NP_523504.2 Gene:Gr28a / 117348 FlyBaseID:FBgn0041247 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_724336.1 Gene:Gr39b / 117347 FlyBaseID:FBgn0041245 Length:369 Species:Drosophila melanogaster


Alignment Length:458 Identity:95/458 - (20%)
Similarity:162/458 - (35%) Gaps:153/458 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LTFISLLGLAPFRLNLNPRKEVQT--SKFSFFAGIVHFLFFVLCFGISVKEGDSIIGYFFQTNIT 84
            |.:.:||||.|:..:....|.||.  |........||       ||||:        ||.|    
  Fly     9 LKYFALLGLVPWSESCAQSKFVQKVYSAILIILNAVH-------FGISI--------YFPQ---- 54

  Fly    85 RFSDGTLRLTGILAMSTIFGFAMFKRQRL---VSIIQNNIVVDEIF------------VRLGMKL 134
                     :..|.:|.:....:|..:.:   |.|:|..:..|:.|            ::..:|:
  Fly    55 ---------SAELFLSLMVNVIVFVARIVCVTVIILQVMVHYDDYFRFCREMKYLGLRLQCELKI 110

  Fly   135 DYRRILLSSF--LISLGM-LLFNV---IYLCVSYSLLVSATISPSFVTFTTFALPHINISLMVFK 193
            ...|:...|:  :::||: .|..|   ||:.:|.|||.          |.:..|..:.|.:....
  Fly   111 HVGRLKWQSYAKILALGIGFLVTVLPSIYVALSGSLLY----------FWSSLLSILIIRMQFVL 165

  Fly   194 FLCTTDLARSRFSMLNEILQDILDAH-----------------IEQLSALELSPMHSVVNHRRYS 241
            .|...:|.....|:|...||::|:.|                 :|.|.||:.|.|..   |..::
  Fly   166 VLLNVELLGHHVSLLGIRLQNVLECHLMGANCTLDGNANRLCSLEFLLALKQSHMQL---HYLFT 227

  Fly   242 HRLRNLISTPMKRYSVTSVIRLNPEYAIKQVSNIHNLLCDICQTIEEYFTYPLLGIIAISFLFIL 306
            |                                           ..:.|.:.:||...     :|
  Fly   228 H-------------------------------------------FNDLFGWSILGTYV-----VL 244

  Fly   307 FDD----FYILEAILNPKRLDVFEADEFFAFFLMQLIWYIVIIVLIVEG---SSRTILHSSYTAA 364
            |.|    .|..:.:|    ::|:|....:|.|.:.:..:..|:|....|   ..:::|..||   
  Fly   245 FSDSTVNIYWTQQVL----VEVYEYKYLYATFSVFVPSFFNILVFCRCGEFCQRQSVLIGSY--- 302

  Fly   365 IVHKILNITDDPEL------RDRLFRLSLQLSHRKVLFTAAGLFRLDRTLIFTITGAATCYLIIL 423
                :.|::..|.:      :|.|....||:....:...|.|....|.:|:.:|..|...|||:|
  Fly   303 ----LRNLSCHPSIGRETSYKDLLMEFILQVEQNVLAINAEGFMSTDNSLLMSILAAKVTYLIVL 363

  Fly   424 IQF 426
            :||
  Fly   364 MQF 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28aNP_523504.2 7tm_7 22..430 CDD:285581 95/458 (21%)
Gr39bNP_724336.1 7tm_7 5..367 CDD:303125 95/458 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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