DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr28a and Gr98c

DIOPT Version :9

Sequence 1:NP_523504.2 Gene:Gr28a / 117348 FlyBaseID:FBgn0041247 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster


Alignment Length:505 Identity:98/505 - (19%)
Similarity:176/505 - (34%) Gaps:173/505 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ERFSQADNVFQALRP-LTFISLLGLAP----FRLNLNPRKEVQTSKFSFFAGIVHFLFFVLCFGI 66
            |..::...:....|| |..:||.||.|    |...|..|:     :|.:.||...:|..:|.   
  Fly     2 EMEAKRSRLLTTARPYLQVLSLFGLTPPAEFFTRTLRKRR-----RFCWMAGYSLYLIAILL--- 58

  Fly    67 SVKEGDSIIGYFFQTNITRFSDGTLRLTGILAMSTIFGFAMFKRQRLVSII-----QNNIVVDEI 126
                   ::.|.|..||.     :|.|.........|...|.:.|:.:.:.     |.||:::  
  Fly    59 -------MVFYEFHANIV-----SLHLEIYKFHVEDFSKVMGRTQKFLIVAIATCNQLNILLN-- 109

  Fly   127 FVRLGMKLD------------------------YR-RILLSS---FLISLGML----------LF 153
            :.|||:..|                        :| |:.||.   .:|.:|::          .|
  Fly   110 YGRLGLIYDEIANLDLGIDKSSKNFCGKSHWWSFRLRLTLSIGLWMVIIIGVIPRLTLGRAGPFF 174

  Fly   154 NVIYLCVSYSLLVSATI-SPSFVTFTTFALPHINISLMVFKFLCTTDLARSRFSMLNEILQDI-L 216
            :.:...::..:|:...: .|.:..|.          |:|::.:..|   |.....|.:.|:|. .
  Fly   175 HWVNQVLTQIILIMLQLKGPEYCLFV----------LLVYELILRT---RHVLEQLKDDLEDFDC 226

  Fly   217 DAHIEQLSALELSPMHSVVNHRRYSHRLRNLISTPMKRYSVTSVIRLNPEYAIKQVSNIHNLLCD 281
            .|.|::|..                                          .:||...:...:..
  Fly   227 GARIQELCV------------------------------------------TLKQNQLLIGRIWR 249

  Fly   282 ICQTIEEYFTYPLLGIIAISFLFILFDDFYILEAI-------LNPK---RLDVFEADEFFAFFLM 336
            :...|..||.:.:.       |..|::...||..:       ::|.   :|:...:..|.:|.|:
  Fly   250 LVDEIGAYFRWSMT-------LLFLYNGLTILHVVNWAIIRSIDPNDCCQLNRLGSITFLSFNLL 307

  Fly   337 QLIWYIVIIVLIVEGSSRTILHSSYTAAIVHKILNITDDPE---LRDRLFRLSLQLSHRKVLFTA 398
            ...::....|       :|....||   |:|:|..:....|   |:..|....||:.|.|:|||.
  Fly   308 LTCFFSECCV-------KTYNSISY---ILHQIGCLPTAEEFQMLKMGLKEYILQMQHLKLLFTC 362

  Fly   399 AGLF----RLDRTLIFTITGAATCYLIILIQFR--------FTHHMDDTS 436
            .|||    :|...::.|:.|    |:||::||:        :..:..|||
  Fly   363 GGLFDINIKLFGGMLVTLCG----YVIIIVQFKIQDFALIGYRQNTSDTS 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr28aNP_523504.2 7tm_7 22..430 CDD:285581 92/481 (19%)
Gr98cNP_524531.2 7tm_7 15..393 CDD:285581 94/475 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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