DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr39b and Gr43a

DIOPT Version :9

Sequence 1:NP_724336.1 Gene:Gr39b / 117347 FlyBaseID:FBgn0041245 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_001286158.1 Gene:Gr43a / 35655 FlyBaseID:FBgn0041243 Length:453 Species:Drosophila melanogaster


Alignment Length:422 Identity:80/422 - (18%)
Similarity:147/422 - (34%) Gaps:89/422 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YLKYFALL----GLVPWSESCAQSKFVQKVYSA------ILIILNAVHFGISIYFPQSAELFLSL 62
            :|.|..||    ..:|...|........||.:|      ::.|::.|:.|:   |..:..|.|:.
  Fly    53 FLTYRGLLFDANSEIPVRASFRMKSATSKVVTALDVSVVVMAIVSGVYCGL---FSLNDTLELND 114

  Fly    63 MVNVIVFVAR--------------IVCVTVIILQVMVHYD--DYFRFCREMKYLGLRLQCELKIH 111
            .:|.|.....              :..|:::.:.::|..|  .:.|..::|..  .:...||.:|
  Fly   115 RLNKIDNTLNAYNNFRRDRWRALGMAAVSLLAISILVGLDVGTWMRIAQDMNI--AQSDTELNVH 177

  Fly   112 VGRLKWQ-SYAKILALGIGFLVTVLPSIY----------VALSGSLLYFWSSLLSILIIRMQFVL 165
                 |. .:..:..:..|..|.:..:.|          ..||.|   |.:...:...|:.|.|.
  Fly   178 -----WYIPFYSLYFILTGLQVNIANTAYGLGRRFGRLNRMLSSS---FLAENNATSAIKPQKVS 234

  Fly   166 VLLNVEL------LGHHVSLLGIRLQNVLECHLMGANCTLDGNANRLCSLE-------------- 210
            .:.||.:      ...|.||      ..|....:.:....|..|.|...|.              
  Fly   235 TVKNVSVNRPAMPSALHASL------TKLNGETLPSEAAGDKAAARSLILNVELLKLGYFPAKNK 293

  Fly   211 --FLLALKQSHMQLHYLFTHFNDLFGWSILGTYVVLFSDSTVNIYWTQQVLVEVYEYKYLYATFS 273
              .|.:|..||..|.......::.||.::|...|..........|:....|:...:..||:....
  Fly   294 GLLLKSLADSHESLGKCVHLLSNSFGIAVLFILVSCLLHLVATAYFLFLELLSKRDNGYLWVQML 358

  Fly   274 VFVPSFFNILVFCRCGEFCQRQSVLIGSYLRNLSCHPSIGRETSYKDLLMEFILQVEQNVLAINA 338
            .....|..:|:.........|:|      .:.:.....|.|:. ::.:|.|.:.:..|.:|.::|
  Fly   359 WICFHFLRLLMVVEPCHLAARES------RKTIQIVCEIERKV-HEPILAEAVKKFWQQLLVVDA 416

  Fly   339 E----GFMSTDNSLLMSILAAKVTYLIVLMQF 366
            :    |....:.::|.|..:|..|||::|:||
  Fly   417 DFSACGLCRVNRTILTSFASAIATYLVILIQF 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr39bNP_724336.1 7tm_7 5..367 CDD:303125 80/422 (19%)
Gr43aNP_001286158.1 7tm_7 10..449 CDD:285581 80/422 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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