DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr39b and Gr21a

DIOPT Version :9

Sequence 1:NP_724336.1 Gene:Gr39b / 117347 FlyBaseID:FBgn0041245 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_001259841.1 Gene:Gr21a / 33251 FlyBaseID:FBgn0041250 Length:447 Species:Drosophila melanogaster


Alignment Length:405 Identity:78/405 - (19%)
Similarity:158/405 - (39%) Gaps:95/405 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LKYFALLGLVPWSESCAQSKFVQKVYSAILIILNAVHFGISIYFPQSAELFLSLMVNVIVFVA-- 71
            |..|.::|::|...:..:....:..||   .....|.:.|.||..|:..:.|.|...|..||.  
  Fly    78 LVLFQIMGVMPIHRNPPEKNLPRTGYS---WGSKQVMWAIFIYSCQTTIVVLVLRERVKKFVTSP 139

  Fly    72 ---------RIVCVTVIILQVMVHYDDYFRFCREMKYLGLRLQCELKIHVGRLKWQSYAKILALG 127
                     .::.::::....::....:              :...::.:.:..|.:|.......
  Fly   140 DKRFDEAIYNVIFISLLFTNFLLPVASW--------------RHGPQVAIFKNMWTNYQYKFFKT 190

  Fly   128 IGFLVTVLPSIYVALSGSLLYFWSSLLSILIIRMQF----------------VLVLLNVELLGHH 176
            .|..: |.|::| .|:.||..| |.||||.|...|:                ::.:||       
  Fly   191 TGSPI-VFPNLY-PLTWSLCVF-SWLLSIAINLSQYFLQPDFRLWYTFAYYPIIAMLN------- 245

  Fly   177 VSLLGIRLQNVLECHLMGANCTLDGNANRLCS----------------LEFL-LALKQSHMQLHY 224
                       ..|.|...||...|.|:|..|                .|:. |.:..||| :..
  Fly   246 -----------CFCSLWYINCNAFGTASRALSDALQTTIRGEKPAQKLTEYRHLWVDLSHM-MQQ 298

  Fly   225 LFTHFNDLFGWSILGTYVVLFSDSTVNIYWTQQVLVEVYEYKYLYATFSVFVPSFFNI-LVFCRC 288
            |...:::::|...|    |:|..:.:..|.:   :.|:.::...|....:||..|:.: |::..|
  Fly   299 LGRAYSNMYGMYCL----VIFFTTIIATYGS---ISEIIDHGATYKEVGLFVIVFYCMGLLYIIC 356

  Fly   289 GE--FCQRQSVLIGSYLRNLSCHPSIGRETSYKDLLMEFILQVEQNVLAINAEGFMSTDNSLLMS 351
            .|  :..|: |.:....:.|:.:.:.....:.|::.| .::.:.:|...:|.:|:.:.:..|:.:
  Fly   357 NEAHYASRK-VGLDFQTKLLNINLTAVDAATQKEVEM-LLVAINKNPPIMNLDGYANINRELITT 419

  Fly   352 ILAAKVTYLIVLMQF 366
            .::...|||:||:||
  Fly   420 NISFMATYLVVLLQF 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr39bNP_724336.1 7tm_7 5..367 CDD:303125 78/405 (19%)
Gr21aNP_001259841.1 7tm_7 75..438 CDD:285581 78/405 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.